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Auxin-responsive GH3 family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841291, updated on 18-Sep-2024

Summary

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Official Full Name
Auxin-responsive GH3 family protein
Primary source
TAIR:AT1G48690
Locus tag
AT1G48690
See related
Araport:AT1G48690
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F11I4.13; F11I4_13
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (18008813..18010086, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene auxin-responsive GH3 family protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_103764.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Auxin-responsive GH3 family protein
NP_175301.1
  • Auxin-responsive GH3 family protein; CONTAINS InterPro DOMAIN/s: GH3 auxin-responsive promoter (InterPro:IPR004993); BEST Arabidopsis thaliana protein match is: Auxin-responsive GH3 family protein (TAIR:AT5G51470.1); Has 884 Blast hits to 880 proteins in 162 species: Archae - 0; Bacteria - 280; Metazoa - 11; Fungi - 0; Plants - 404; Viruses - 0; Other Eukaryotes - 189 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18008813..18010086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_103764.3 → NP_175301.1  Auxin-responsive GH3 family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175301.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9C737
    Conserved Domains (1) summary
    cl21606
    Location:7 → 190
    PLN02247; indole-3-acetic acid-amido synthetase
Nucleotide Protein
Heading Accession and Version

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