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NQR ARP protein (REF) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 841391, updated on 18-Sep-2024

Summary

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Official Symbol
NQR
Official Full Name
ARP protein (REF)
Primary source
TAIR:AT1G49670
Locus tag
AT1G49670
See related
Araport:AT1G49670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F14J22.10; F14J22_10
Summary
molecular function has not been defined. Was shown involved in oxidative stress tolerance.
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Genomic context

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See NQR in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Sequence:
Chromosome: 1; NC_003070.9 (18380804..18386146, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene carboxyesterase 5 Neighboring gene mutator transposase MUDRA protein Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis thaliana NADPH oxidoreductase homologs confer tolerance of yeasts toward the thiol-oxidizing drug diamide. Babiychuk E, et al. J Biol Chem, 1995 Nov 3. PMID 7592828
  2. A Repressor Protein Complex Regulates Leaf Growth in Arabidopsis. Gonzalez N, et al. Plant Cell, 2015 Aug. PMID 26232487, Free PMC Article
  3. Proteome analysis of Arabidopsis leaf peroxisomes reveals novel targeting peptides, metabolic pathways, and defense mechanisms. Reumann S, et al. Plant Cell, 2007 Oct. PMID 17951448, Free PMC Article
  4. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  5. Arabidopsis G-protein interactome reveals connections to cell wall carbohydrates and morphogenesis. Klopffleisch K, et al. Mol Syst Biol, 2011 Sep 27. PMID 21952135, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001198253.1
NM_103855.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to oxidative stress IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within response to oxidative stress IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 
located_in nucleus HDA PubMed 
located_in peroxisome HDA PubMed 

General protein information

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Preferred Names
ARP protein (REF)
NP_001185182.1
  • NQR; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1).
NP_175390.2
  • NQR; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress, metabolic process; LOCATED IN: mitochondrion, peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Zinc-binding dehydrogenase family protein (TAIR:AT5G37980.1); Has 139834 Blast hits to 139487 proteins in 3900 species: Archae - 1368; Bacteria - 93458; Metazoa - 6844; Fungi - 8617; Plants - 3827; Viruses - 2; Other Eukaryotes - 25718 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    18380804..18386146 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001198253.1 → NP_001185182.1  ARP protein (REF) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185182.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W512, F4I3C3, Q39174
    Conserved Domains (4) summary
    cd08250
    Location:286 → 640
    Mgc45594_like; Mgc45594 gene product and other MDR family members
    cd05323
    Location:9 → 254
    ADH_SDR_c_like; insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs
    COG2130
    Location:285 → 639
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
    pfam00106
    Location:9 → 210
    adh_short; short chain dehydrogenase

  2. NM_103855.5 → NP_175390.2  ARP protein (REF) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_175390.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W512, Q39174, Q9FX95
    Conserved Domains (4) summary
    cd08250
    Location:286 → 617
    Mgc45594_like; Mgc45594 gene product and other MDR family members
    cd05323
    Location:9 → 254
    ADH_SDR_c_like; insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs
    COG2130
    Location:285 → 616
    CurA; NADPH-dependent curcumin reductase CurA [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
    pfam00106
    Location:9 → 210
    adh_short; short chain dehydrogenase
Nucleotide Protein
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