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ARL2 ARG1-like 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842292, updated on 18-Sep-2024

Summary

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Official Symbol
ARL2
Official Full Name
ARG1-like 2
Primary source
TAIR:AT1G59980
Locus tag
AT1G59980
See related
Araport:AT1G59980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARF-LIKE 2; ARG1-like 2; ATDJC39; GPS4; gravity persistence signal 4; T2K10.3; T2K10_3
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Genomic context

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See ARL2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Sequence:
Chromosome: 1; NC_003070.9 (22080689..22086845)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. Tamura K, et al. Plant Cell, 2010 Dec. PMID 21189294, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001333873.1
NM_104690.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ARG1-like 2
NP_176206.2
  • ARG1-like 2 (ARL2); FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, leaf whorl, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: ARG1-like 1 (TAIR:AT1G24120.1); Has 25507 Blast hits to 25492 proteins in 3344 species: Archae - 188; Bacteria - 10073; Metazoa - 4427; Fungi - 2514; Plants - 2606; Viruses - 73; Other Eukaryotes - 5626 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22080689..22086845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001333872.1 → NP_001320772.1  ARG1-like 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WLL9, A0A1P8ANV3, A0A5S9WMZ4

  2. NM_104690.4 → NP_176206.2  ARG1-like 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176206.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q6XL73, Q8GWE4, Q9ZUJ4
    UniProtKB/TrEMBL
    A0A178WLL9, A0A654EPP0
    Conserved Domains (2) summary
    PRK14295
    Location:11 → 176
    PRK14295; molecular chaperone DnaJ
    pfam00226
    Location:23 → 85
    DnaJ; DnaJ domain

  3. NM_001333873.1 → NP_001320771.1  ARG1-like 2 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WLL9, A0A1P8ANT9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6XL73.2

Gene LinkOut

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