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NIK3 NSP-interacting kinase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842374, updated on 18-Sep-2024

Summary

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Official Symbol
NIK3
Official Full Name
NSP-interacting kinase 3
Primary source
TAIR:AT1G60800
Locus tag
AT1G60800
See related
Araport:AT1G60800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtNIK3; F8A5.31; F8A5_31; NSP-interacting kinase 3
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Genomic context

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See NIK3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Sequence:
Chromosome: 1; NC_003070.9 (22383393..22387766, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene cysteine/histidine-rich C1 domain protein Neighboring gene trichome birefringence-like protein (DUF828) Neighboring gene ATP-citrate lyase A-2 Neighboring gene RALF-like 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. CIK Receptor Kinases Determine Cell Fate Specification during Early Anther Development in Arabidopsis. Cui Y, et al. Plant Cell, 2018 Oct. PMID 30201822, Free PMC Article
  2. A group of receptor kinases are essential for CLAVATA signalling to maintain stem cell homeostasis. Hu C, et al. Nat Plants, 2018 Apr. PMID 29581511
  3. An extracellular network of Arabidopsis leucine-rich repeat receptor kinases. Smakowska-Luzan E, et al. Nature, 2018 Jan 18. PMID 29320478, Free PMC Article
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001333916.1
NM_104763.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables coreceptor activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within anther development IGI
Inferred from Genetic Interaction
more info
 PubMed 
acts_upstream_of_or_within homeostasis of number of meristem cells IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NSP-interacting kinase 3
NP_176279.1
  • NSP-interacting kinase 3 (NIK3); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: NSP-interacting kinase 2 (TAIR:AT3G25560.1); Has 179068 Blast hits to 122128 proteins in 4509 species: Archae - 118; Bacteria - 15693; Metazoa - 45449; Fungi - 8996; Plants - 88569; Viruses - 414; Other Eukaryotes - 19829 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22383393..22387766 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104763.3 → NP_176279.1  NSP-interacting kinase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176279.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O22717, Q93ZS4
    UniProtKB/TrEMBL
    A0A5S9WSM5, A0A654EJS3, A0A7G2E1W0
    Conserved Domains (3) summary
    PLN00113
    Location:13 → 188
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:78 → 99
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:307 → 577
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001333916.1 → NP_001322341.1  NSP-interacting kinase 3 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W553, A0A1P8ATQ8, A0A384LIN7, A0A7G2E1W0
    Conserved Domains (3) summary
    PLN00113
    Location:12 → 147
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:11 → 32
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:240 → 510
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q93ZS4.1

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