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SCRL6 SCR-like 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842390, updated on 18-Sep-2024

Summary

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Official Symbol
SCRL6
Official Full Name
SCR-like 6
Primary source
TAIR:AT1G60985
Locus tag
AT1G60985
See related
Araport:AT1G60985
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SCR-like 6
Summary
Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).
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Genomic context

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See SCRL6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (22456749..22457326)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene gibberellin 20-oxidase 4 Neighboring gene SCR-like 8 Neighboring gene SCR-like 4 Neighboring gene SCR-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_104779.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
SCR-like 6
NP_564768.1
  • SCR-like 6 (SCRL6); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: signal transduction; LOCATED IN: endomembrane system; EXPRESSED IN: central cell, embryo; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: Plant self-incompatibility response (InterPro:IPR010682); BEST Arabidopsis thaliana protein match is: SCR-like 4 (TAIR:AT1G60986.1); Has 36 Blast hits to 36 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22456749..22457326
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104779.4 → NP_564768.1  SCR-like 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564768.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P82625, Q570C5, Q8L952
    UniProtKB/TrEMBL
    A0A5S9WR12, A0A654EJU9
    Conserved Domains (1) summary
    pfam06876
    Location:16 → 91
    SCRL; Plant self-incompatibility response (SCRL) protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P82625.1

Gene LinkOut

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