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1,3-beta-glucan synthase component (DUF1218) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842398, updated on 18-Sep-2024

Summary

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Official Full Name
1,3-beta-glucan synthase component (DUF1218)
Primary source
TAIR:AT1G61065
Locus tag
AT1G61065
See related
Araport:AT1G61065
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (22490221..22491539, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene alpha 1,4-glycosyltransferase family protein Neighboring gene F-box family protein Neighboring gene low-molecular-weight cysteine-rich 66 Neighboring gene Hydroxyproline-rich glycoprotein family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_104787.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
1,3-beta-glucan synthase component (DUF1218)
NP_564769.1
  • Protein of unknown function (DUF1218); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1218 (InterPro:IPR009606); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1218) (TAIR:AT4G27435.1); Has 557 Blast hits to 557 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 557; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    22490221..22491539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_104787.3 → NP_564769.1  1,3-beta-glucan synthase component (DUF1218) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_564769.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WDJ1, A0A5S9WR34, Q8LCJ0, Q8W576
    Conserved Domains (1) summary
    pfam06749
    Location:57 → 152
    DUF1218; Protein of unknown function (DUF1218)
Nucleotide Protein
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