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DIR5 Disease resistance-responsive (dirigent-like protein) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842720, updated on 18-Sep-2024

Summary

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Official Symbol
DIR5
Official Full Name
Disease resistance-responsive (dirigent-like protein) family protein
Primary source
TAIR:AT1G64160
Locus tag
AT1G64160
See related
Araport:AT1G64160
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtDIR5; dirigent protein 5; F22C12.8; F22C12_8
Summary
Encodes a dirigent protein involved in the synthesis of (-)pinoresinol. Dirigent proteins impart stereoselectivity on the phenoxy radical coupling reaction yielding optically active lignans from two molecules of coniferyl alcohol.
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Genomic context

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See DIR5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_003070.9 (23813943..23814839)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Uncharacterized protein family (UPF0016) Neighboring gene cation/H+ exchanger 16 Neighboring gene intracellular protein transport protein USO1-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Opposite stereoselectivities of dirigent proteins in Arabidopsis and schizandra species. Kim KW, et al. J Biol Chem, 2012 Oct 5. PMID 22854967, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_105089.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables guiding stereospecific synthesis activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within (-)-pinoresinol biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Disease resistance-responsive (dirigent-like protein) family protein
NP_176598.1
  • Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: lignan biosynthetic process, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: petal, hypocotyl, root; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT4G23690.1); Has 792 Blast hits to 791 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 792; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    23813943..23814839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105089.3 → NP_176598.1  Disease resistance-responsive (dirigent-like protein) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176598.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SH66
    UniProtKB/TrEMBL
    A0A178WBH5, A0A5S9WTA0, A0A654EQY3
    Conserved Domains (1) summary
    pfam03018
    Location:36 → 178
    Dirigent; Dirigent-like protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SH66.1

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