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GroES-like zinc-binding alcohol dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842779, updated on 18-Sep-2024

Summary

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Official Full Name
GroES-like zinc-binding alcohol dehydrogenase family protein
Primary source
TAIR:AT1G64710
Locus tag
AT1G64710
See related
Araport:AT1G64710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F13O11.3; F13O11_3
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Sequence:
Chromosome: 1; NC_003070.9 (24044686..24046621)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene branchless trichome Neighboring gene DUF4228 domain protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene miscRNA Neighboring gene alpha-1 tubulin Neighboring gene ncRNA Neighboring gene deletion of SUV3 suppressor 1(I)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001084304.1
NM_001334177.1
NM_105146.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
GroES-like zinc-binding alcohol dehydrogenase family protein
NP_001077773.1
  • GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 31850 Blast hits to 31834 proteins in 3141 species: Archae - 706; Bacteria - 20375; Metazoa - 1244; Fungi - 2231; Plants - 4096; Viruses - 3; Other Eukaryotes - 3195 (source: NCBI BLink).
NP_176652.3
  • GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 32712 Blast hits to 32690 proteins in 3136 species: Archae - 724; Bacteria - 20870; Metazoa - 1276; Fungi - 2315; Plants - 4127; Viruses - 3; Other Eukaryotes - 3397 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24044686..24046621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105146.6 → NP_176652.3  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I880, Q8VZ49, Q9XIS0
    UniProtKB/TrEMBL
    A0A5S9WS31

  2. NM_001084304.1 → NP_001077773.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077773.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WS31, A8MR36
    Conserved Domains (2) summary
    cd08301
    Location:1 → 356
    alcohol_DH_plants; Plant alcohol dehydrogenase
    PLN02740
    Location:1 → 357
    PLN02740; Alcohol dehydrogenase-like

  3. NM_001334177.1 → NP_001323423.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AX34, A0A5S9WS31
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8VZ49.1

Gene LinkOut

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