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KOR2 Six-hairpin glycosidases superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 842872, updated on 18-Sep-2024

Summary

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Official Symbol
KOR2
Official Full Name
Six-hairpin glycosidases superfamily protein
Primary source
TAIR:AT1G65610
Locus tag
AT1G65610
See related
Araport:AT1G65610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A2; ATGH9A2; AtKOR2; F5I14.14; F5I14_14; KORRIGAN 2
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Genomic context

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See KOR2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (24391672..24395503, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene beta-hexosaminidase 3 Neighboring gene Lateral organ boundaries (LOB) domain family protein Neighboring gene DegP protease 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105234.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables cellulase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Six-hairpin glycosidases superfamily protein
NP_176738.1
  • KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    24391672..24395503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105234.3 → NP_176738.1  Six-hairpin glycosidases superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_176738.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O04478
    UniProtKB/TrEMBL
    A0A178WC79, A0A654EL95
    Conserved Domains (1) summary
    cl02959
    Location:120 → 594
    Glyco_hydro_9; Glycosyl hydrolase family 9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O04478.1

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