U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TCP12 TCP domain protein 12 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843212, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
TCP12
Official Full Name
TCP domain protein 12
Primary source
TAIR:AT1G68800
Locus tag
AT1G68800
See related
Araport:AT1G68800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
BRANCHED 2; BRC2; F14K14.9; F14K14_9; TCP domain protein 12
Summary
Encodes a TCP transcription factor, closely related to teosinte branched1, arrests axillary bud development and prevents axillary bud outgrowth. Transcription level and mutant phenotype are weaker than its homolog BRC1 (At3G18550).
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TCP12 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_003070.9 (25845892..25850131, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CLAVATA3/ESR-RELATED 12 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene Transmembrane Fragile-X-F-associated protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds. Aguilar-Martínez JA, et al. Plant Cell, 2007 Feb. PMID 17307924, Free PMC Article
  2. Evolution of double positive autoregulatory feedback loops in CYCLOIDEA2 clade genes is associated with the origin of floral zygomorphy. Yang X, et al. Plant Cell, 2012 May. PMID 22649271, Free PMC Article
  3. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
  4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001334381.1
NM_105554.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of DNA-templated transcription TAS
Traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within regulation of secondary shoot formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
TCP domain protein 12
NP_177047.2
  • TCP domain protein 12 (TCP12); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), CYC/TB1, R domain (InterPro:IPR017888), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor (TAIR:AT1G67260.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    25845892..25850131 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105554.3 → NP_177047.2  TCP domain protein 12 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177047.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0AQW4, Q9CA43
    UniProtKB/TrEMBL
    A0A178WAF7, A0A7G2E4B1
    Conserved Domains (1) summary
    pfam03634
    Location:112 → 236
    TCP; TCP family transcription factor

  2. NM_001334381.1 → NP_001323269.1  TCP domain protein 12 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WAF7, A0A1P8AWJ0, A0A5S9WSP4
    Conserved Domains (1) summary
    pfam03634
    Location:112 → 236
    TCP; TCP family transcription factor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0AQW4.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools