U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Nucleotide-diphospho-sugar transferase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843400, updated on 18-Sep-2024

Summary

Official Full Name
Nucleotide-diphospho-sugar transferase family protein
Primary source
TAIR:AT1G70630
Locus tag
AT1G70630
See related
Araport:AT1G70630
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F24J13.20; F24J13_20; RAY1; REDUCED ARABINOSE YARIV 1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (26631112..26634259)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transporter associated with antigen processing protein 1 Neighboring gene cyclin-like protein Neighboring gene octicosapeptide/Phox/Bem1p (PB1) domain-containing protein Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein Neighboring gene microRNA ath-MIR777 precursor

General gene information

NM_001334473.1
NM_001334474.1
NM_001334475.1
NM_105731.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables glycosyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell wall biogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IDA
Inferred from Direct Assay
more info
PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
 
located_in cytoplasm ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
Nucleotide-diphospho-sugar transferase family protein
NP_177220.2
  • Nucleotide-diphospho-sugar transferase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388), Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069); BEST Arabidopsis thaliana protein match is: xyloglucanase 113 (TAIR:AT2G35610.1); Has 427 Blast hits to 427 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 379; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    26631112..26634259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334470.1NP_001322086.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I6V0, Q9S7C7
  2. NM_001334471.1NP_001322081.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ASV0, A0A5S9WRD3
  3. NM_001334472.1NP_001322082.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ASZ1, A0A5S9WRD3
  4. NM_105731.4NP_177220.2  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177220.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4I6V0, Q9S7C7
    Conserved Domains (1) summary
    pfam03407
    Location:298520
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
  5. NM_001334473.1NP_001322083.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8ASW5
  6. NM_001334474.1NP_001322084.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AT04, A0A5S9WRD3
  7. NM_001334475.1NP_001322085.1  Nucleotide-diphospho-sugar transferase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178WK09, A0A1P8ASW3