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3-oxo-5-alpha-steroid 4-dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843591, updated on 18-Sep-2024

Summary

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Official Full Name
3-oxo-5-alpha-steroid 4-dehydrogenase family protein
Primary source
TAIR:AT1G72590
Locus tag
AT1G72590
See related
Araport:AT1G72590
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28P22.22; F28P22_22
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Genomic context

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Location:
chromosome: 1
Exon count:
6
Sequence:
Chromosome: 1; NC_003070.9 (27335531..27337123)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene uncharacterized protein Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene ncRNA Neighboring gene germin-like protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. POLYPRENOL REDUCTASE2 Deficiency Is Lethal in Arabidopsis Due to Male Sterility. Jozwiak A, et al. Plant Cell, 2015 Dec. PMID 26628744, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_105918.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables polyprenol reductase activity IEA
Inferred from Electronic Annotation
more info
  
enables steroid dehydrogenase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within polyprenol metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 

General protein information

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Preferred Names
3-oxo-5-alpha-steroid 4-dehydrogenase family protein
NP_177403.1
  • 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors, 3-oxo-5-alpha-steroid 4-dehydrogenase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104); BEST Arabidopsis thaliana protein match is: 3-oxo-5-alpha-steroid 4-dehydrogenase family protein (TAIR:AT2G16530.1); Has 1090 Blast hits to 1086 proteins in 214 species: Archae - 0; Bacteria - 21; Metazoa - 397; Fungi - 195; Plants - 181; Viruses - 0; Other Eukaryotes - 296 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27335531..27337123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105918.3 → NP_177403.1  3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177403.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9CAH5
    UniProtKB/TrEMBL
    A0A654ENE2
    Conserved Domains (1) summary
    PLN03164
    Location:20 → 320
    PLN03164; 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9CAH5.1

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