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ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843602, updated on 18-Sep-2024

Summary

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Official Full Name
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Primary source
TAIR:AT1G72700
Locus tag
AT1G72700
See related
Araport:AT1G72700
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F28P22.11; F28P22_11
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Sequence:
Chromosome: 1; NC_003070.9 (27365772..27371784)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene neurofilament heavy protein Neighboring gene ncRNA Neighboring gene casein kinase 1-like protein 2 Neighboring gene hypothetical protein (DUF3511) Neighboring gene DEA(D/H)-box RNA helicase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Lipid Flippases ALA4 and ALA5 Play Critical Roles in Cell Expansion and Plant Growth. Davis JA, et al. Plant Physiol, 2020 Apr. PMID 32051180, Free PMC Article
  2. Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters. Zhang X, et al. Plant Cell, 2020 May. PMID 32193204, Free PMC Article
  3. Identification of ubiquitinated proteins in Arabidopsis. Manzano C, et al. Plant Mol Biol, 2008 Sep. PMID 18535787
  4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001334546.1
NM_001334547.1
NM_105929.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables P-type ion transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables flippase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cell growth IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein localization involved in auxin polar transport IGI
Inferred from Genetic Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
NP_177414.1
  • ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27365772..27371784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_105929.5 → NP_177414.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177414.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SGG3
    UniProtKB/TrEMBL
    A0A178WGF7, A0A5S9WTT9, A0A654EPY1
    Conserved Domains (1) summary
    TIGR01652
    Location:58 → 1163
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase

  2. NM_001334546.1 → NP_001322800.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SGG3
    UniProtKB/TrEMBL
    A0A178WGF7, A0A5S9WTT9, A0A654EPY1
    Conserved Domains (1) summary
    TIGR01652
    Location:58 → 1163
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase

  3. NM_001334547.1 → NP_001322799.1  ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SGG3
    UniProtKB/TrEMBL
    A0A178WGF7, A0A5S9WTT9, A0A654EPY1
    Conserved Domains (1) summary
    TIGR01652
    Location:58 → 1163
    ATPase-Plipid; phospholipid-translocating P-type ATPase, flippase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SGG3.1

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