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anoctamin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843633, updated on 18-Sep-2024

Summary

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Official Full Name
anoctamin-like protein
Primary source
TAIR:AT1G73020
Locus tag
AT1G73020
See related
Araport:AT1G73020
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F3N23.22; F3N23_22
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Sequence:
Chromosome: 1; NC_003070.9 (27469496..27473660, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene PYR1-like 3 Neighboring gene inorganic pyrophosphatase 1 Neighboring gene ncRNA Neighboring gene SNF7 family protein Neighboring gene Mannose-binding lectin superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phospholipid scrambling by a TMEM16 homolog of Arabidopsis thaliana. Boccaccio A, et al. FEBS J, 2022 May. PMID 34775680, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001198459.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
anoctamin-like protein
NP_001185388.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632).
NP_177445.2
  • unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632); Has 1198 Blast hits to 1128 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    27469496..27473660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001334561.1 → NP_001320486.1  anoctamin-like protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFS9, Q5XVG1, Q9SSM5
    UniProtKB/TrEMBL
    A0A178WEA6, A0A5S9WTX6
    Conserved Domains (1) summary
    pfam04547
    Location:188 → 627
    Anoctamin; Calcium-activated chloride channel

  2. NM_105960.5 → NP_177445.2  anoctamin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177445.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFS9, Q5XVG1, Q9SSM5
    UniProtKB/TrEMBL
    A0A178WEA6, A0A5S9WTX6
    Conserved Domains (1) summary
    pfam04547
    Location:188 → 627
    Anoctamin; Calcium-activated chloride channel

  3. NM_001198459.1 → NP_001185388.1  anoctamin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001185388.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFS9, Q5XVG1, Q9SSM5
    UniProtKB/TrEMBL
    A0A178WEA6, A0A5S9WTX6
    Conserved Domains (1) summary
    pfam04547
    Location:188 → 627
    Anoctamin; Calcium-activated chloride channel
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0MFS9.1

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