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NmrA-like negative transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 843867, updated on 18-Sep-2024

Summary

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Official Full Name
NmrA-like negative transcriptional regulator family protein
Primary source
TAIR:AT1G75300
Locus tag
AT1G75300
See related
Araport:AT1G75300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22H5.16; F22H5_16
Summary
encodes a protein whose sequence is similar to an isoflavone reductase
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Sequence:
Chromosome: 1; NC_003070.9 (28255495..28257040)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NmrA-like negative transcriptional regulator family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene ncRNA Neighboring gene auxin-like 1 protein Neighboring gene ornithine carbamoyltransferase Neighboring gene nucleolar-like protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_106185.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in mitochondrion HDA PubMed 

General protein information

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Preferred Names
NmrA-like negative transcriptional regulator family protein
NP_177665.1
  • NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1595 Blast hits to 1591 proteins in 336 species: Archae - 8; Bacteria - 421; Metazoa - 0; Fungi - 508; Plants - 551; Viruses - 7; Other Eukaryotes - 100 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    28255495..28257040
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106185.2 → NP_177665.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_177665.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2E2W9, Q9FRM1
    Conserved Domains (1) summary
    pfam05368
    Location:8 → 254
    NmrA; NmrA-like family
Nucleotide Protein
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