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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844217, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT1G78810
Locus tag
AT1G78810
See related
Araport:AT1G78810
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9K20.15; F9K20_15
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Genomic context

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Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (29628234..29630578, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pathogenesis-related family protein Neighboring gene centromere protein X Neighboring gene UDP-Glycosyltransferase superfamily protein Neighboring gene LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) Neighboring gene D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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NM_001334848.1
NM_106528.4
NM_202444.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_178002.2
  • unknown protein; Has 75 Blast hits to 52 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 2; Plants - 66; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
NP_974173.1
  • unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29628234..29630578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106528.4 → NP_178002.2  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178002.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W2Q6, A0A7G2E5W4, Q8W461

  2. NM_202444.2 → NP_974173.1  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974173.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W145, A0A384KWR3, A0A7G2E3Z8, F4IBV6

  3. NM_001334848.1 → NP_001320949.1  uncharacterized protein AT1G78810 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W145, A0A384KWR3, A0A7G2E3Z8, F4IBV6
Nucleotide Protein
Heading Accession and Version

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