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AT1G78895 Reticulon family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 844227, updated on 15-Feb-2024

Summary

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Gene symbol
AT1G78895
Gene description
Reticulon family protein
Primary source
Araport:AT1G78895
Locus tag
AT1G78895
See related
TAIR:AT1G78895
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See AT1G78895 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_003070.9 (29658116..29660006, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme 35 Neighboring gene Ubiquitin-specific protease family C19-related protein Neighboring gene uncharacterized protein Neighboring gene vacuolar ATP synthase subunit A Neighboring gene Pseudouridine synthase family protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_106538.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Reticulon family protein
NP_565194.1
  • Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT1G16825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    29658116..29660006 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_106538.3 → NP_565194.1  Reticulon family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565194.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WPV4, Q8GWH5, Q8LEX0
    UniProtKB/TrEMBL
    A0A178WDP1, A0A5S9WVL8, A0A7G2E416
    Conserved Domains (1) summary
    pfam02453
    Location:6 → 131
    Reticulon
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GWH5.1

Gene LinkOut

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