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ALT1 alanine transaminase ALT1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 850778, updated on 2-Nov-2024

Summary

Official Symbol
ALT1
Official Full Name
alanine transaminase ALT1
Primary source
SGD:S000004079
Locus tag
YLR089C
See related
AllianceGenome:SGD:S000004079; FungiDB:YLR089C; VEuPathDB:YLR089C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables L-alanine:2-oxoglutarate aminotransferase activity and pyridoxal phosphate binding activity. Involved in alanine biosynthetic process and alanine catabolic process. Is active in mitochondrion. Human ortholog(s) of this gene implicated in neurodevelopmental disorder with spastic paraplegia and microcephaly. Orthologous to several human genes including GPT (glutamic--pyruvic transaminase). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See ALT1 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (318237..320015, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene Csf1p Neighboring gene GPI-anchor transamidase subunit GAA1 Neighboring gene Xdj1p Neighboring gene Gep5p

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables L-alanine:2-oxoglutarate aminotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables L-alanine:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables L-alanine:2-oxoglutarate aminotransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables pyridoxal phosphate binding IDA
Inferred from Direct Assay
more info
PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in L-alanine catabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in alanine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in alanine catabolic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
alanine transaminase ALT1
NP_013190.1
  • Alanine transaminase (glutamic pyruvic transaminase); involved in alanine biosynthesis and catabolism; TOR1-independent role in determining chronological lifespan; expression is induced in the presence of alanine; repression is mediated by Nrg1p; ALT1 has a paralog, ALT2, that arose from the whole genome duplication; Alt2p is catalytically inactive

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    318237..320015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181976.1NP_013190.1  TPA: alanine transaminase ALT1 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013190.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VY89, P52893
    UniProtKB/TrEMBL
    A7A0Z3, B3LT57, B5VN23, C7GQR2, C8ZD59, G2WIT1, N1NZK1
    Conserved Domains (1) summary
    PTZ00377
    Location:111590
    PTZ00377; alanine aminotransferase; Provisional