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YKE2 tubulin-binding prefolding complex subunit YKE2 [ Saccharomyces cerevisiae S288C ]

Gene ID: 850897, updated on 28-Oct-2024

Summary

Official Symbol
YKE2
Official Full Name
tubulin-binding prefolding complex subunit YKE2
Primary source
SGD:S000004190
Locus tag
YLR200W
See related
AllianceGenome:SGD:S000004190; FungiDB:YLR200W; VEuPathDB:YLR200W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
GIM1; PFD6
Summary
Enables tubulin binding activity. Involved in positive regulation of transcription elongation by RNA polymerase II; protein folding; and tubulin complex assembly. Located in cytoplasm. Part of prefoldin complex. Orthologous to human PFDN6 (prefoldin subunit 6). [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

See YKE2 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (549012..549356)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene snoRNP complex protein NOP56 Neighboring gene Pba1p Neighboring gene ubiquinone biosynthesis protein COQ9 Neighboring gene Mss51p

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables protein-folding chaperone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables tubulin binding IDA
Inferred from Direct Assay
more info
PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in chaperone-mediated protein complex assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of transcription elongation by RNA polymerase II IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of transcription elongation by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 
involved_in protein folding IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tubulin complex assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of prefoldin complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of prefoldin complex IEA
Inferred from Electronic Annotation
more info
 
part_of prefoldin complex IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
tubulin-binding prefolding complex subunit YKE2
NP_013301.1
  • Subunit of the heterohexameric Gim/prefoldin protein complex; involved in the folding of alpha-tubulin, beta-tubulin, and actin; prefoldin complex also localizes to chromatin of actively transcribed genes in the nucleus and facilitates transcriptional elongation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    549012..549356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182087.1NP_013301.1  TPA: tubulin-binding prefolding complex subunit YKE2 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013301.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VYK2, P52553
    UniProtKB/TrEMBL
    A7A189, B3RH90, C7GIT1, G2WJ31, N1NYD5
    Conserved Domains (1) summary
    cd00632
    Location:1105
    Prefoldin_beta; Prefoldin beta; Prefoldin is a hexameric molecular chaperone complex, composed of two evolutionarily related subunits (alpha and beta), which are found in both eukaryotes and archaea. Prefoldin binds and stabilizes newly synthesized polypeptides ...