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SWC7 Swc7p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851101, updated on 28-Oct-2024

Summary

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Official Symbol
SWC7
Official Full Name
Swc7p
Primary source
SGD:S000004377
Locus tag
YLR385C
See related
AllianceGenome:SGD:S000004377; FungiDB:YLR385C; VEuPathDB:YLR385C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
AWS1
Summary
Involved in chromatin remodeling. Located in nucleus. Part of Swr1 complex. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

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See SWC7 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (892992..893390, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene DNA repair protein SMC6 Neighboring gene Elongator subunit IKI3 Neighboring gene Vac14p Neighboring gene Reh1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001144.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ATP binding facilitates target search of SWR1 chromatin remodeler by promoting one-dimensional diffusion on DNA. Carcamo CC, et al. Elife, 2022 Jul 25. PMID 35876491, Free PMC Article
  2. Functional characterization and architecture of recombinant yeast SWR1 histone exchange complex. Lin CL, et al. Nucleic Acids Res, 2017 Jul 7. PMID 28499038, Free PMC Article
  3. N terminus of Swr1 binds to histone H2AZ and provides a platform for subunit assembly in the chromatin remodeling complex. Wu WH, et al. J Biol Chem, 2009 Mar 6. PMID 19088068, Free PMC Article
  4. Bdf1 Bromodomains Are Essential for Meiosis and the Expression of Meiotic-Specific Genes. García-Oliver E, et al. PLoS Genet, 2017 Jan. PMID 28068333, Free PMC Article
  5. Dual function of Swc5 in SWR remodeling ATPase activation and histone H2A eviction. Sun L, et al. Nucleic Acids Res, 2017 Sep 29. PMID 28973436, Free PMC Article

See all (39) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
  
involved_in chromatin remodeling IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
part_of Swr1 complex IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Swc7p
NP_013489.1
  • hypothetical protein; component of the Swr1p complex that incorporates Htz1p into chromatin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    892992..893390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182274.1 → NP_013489.1  TPA: Swc7p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013489.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZ20, Q06707
    UniProtKB/TrEMBL
    A7A1R0, N1NYR6
    Conserved Domains (1) summary
    pfam17330
    Location:26 → 128
    SWC7; SWR1 chromatin-remodelling complex, subunit Swc7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q06707.1

Gene LinkOut

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