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FLO9 flocculin FLO9 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851236, updated on 2-Nov-2024

Summary

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Official Symbol
FLO9
Official Full Name
flocculin FLO9
Primary source
SGD:S000000059
Locus tag
YAL063C
See related
AllianceGenome:SGD:S000000059; FungiDB:YAL063C; VEuPathDB:YAL063C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable D-mannose binding activity. Involved in cell-substrate adhesion and flocculation. Predicted to be located in fungal-type cell wall. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See FLO9 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_001133.9 (24000..27968, complement)

Chromosome I - NC_001133.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene glutamate dehydrogenase (NADP(+)) GDH3 Neighboring gene putative dehydrogenase BDH2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001133.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic characterization and modification of a bioethanol-producing yeast strain. Zhang K, et al. Appl Microbiol Biotechnol, 2018 Mar. PMID 29333587
  2. Review: the dominant flocculation genes of Saccharomyces cerevisiae constitute a new subtelomeric gene family. Teunissen AW, et al. Yeast, 1995 Sep 15. PMID 7502576
  3. Multiple sequence signals determine the distribution of glycosylphosphatidylinositol proteins between the plasma membrane and cell wall in Saccharomyces cerevisiae. Frieman MB, et al. Microbiology (Reading), 2004 Oct. PMID 15470092
  4. Construction of flocculent Kluyveromyces marxianus strains suitable for high-temperature ethanol fermentation. Nonklang S, et al. Biosci Biotechnol Biochem, 2009 May. PMID 19420680
  5. Structural basis of flocculin-mediated social behavior in yeast. Veelders M, et al. Proc Natl Acad Sci U S A, 2010 Dec 28. PMID 21149680, Free PMC Article

See all (26) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables D-mannose binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-substrate adhesion IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in flocculation IEA
Inferred from Electronic Annotation
more info
  
involved_in flocculation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
located_in fungal-type cell wall ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
flocculin FLO9
NP_009338.1
  • Lectin-like protein with similarity to Flo1p; thought to be expressed and involved in flocculation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001133.9 Reference assembly

    Range
    24000..27968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178205.1 → NP_009338.1  TPA: flocculin FLO9 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009338.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VPF6, P39712
    UniProtKB/TrEMBL
    A0A088DMZ7
    Conserved Domains (2) summary
    pfam07691
    Location:118 → 249
    PA14; PA14 domain
    pfam13928
    Location:1022 → 1063
    Flocculin_t3; Flocculin type 3 repeat
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39712.2

Gene LinkOut

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