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RRI1 COP9 signalosome catalytic subunit RRI1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851310, updated on 14-Nov-2024

Summary

Official Symbol
RRI1
Official Full Name
COP9 signalosome catalytic subunit RRI1
Primary source
SGD:S000002375
Locus tag
YDL216C
See related
AllianceGenome:SGD:S000002375; FungiDB:YDL216C; VEuPathDB:YDL216C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
CSN5; JAB1
Summary
Enables metalloendopeptidase activity. Involved in several processes, including cellular response to pheromone; positive regulation of ergosterol biosynthetic process; and protein deneddylation. Part of COP9 signalosome. Orthologous to human COPS5 (COP9 signalosome subunit 5). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See RRI1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (68997..70319, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene translocation channel protein TIM22 Neighboring gene glutamate dehydrogenase (NAD(+)) Neighboring gene serine/threonine protein kinase PRR2

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables deNEDDylase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables metallopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
Process Evidence Code Pubs
involved_in cellular response to pheromone IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in conjugation with cellular fusion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of ergosterol biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein deneddylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in reproductive process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of COP9 signalosome IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of COP9 signalosome IDA
Inferred from Direct Assay
more info
PubMed 
part_of COP9 signalosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
COP9 signalosome catalytic subunit RRI1
NP_010065.2
  • Catalytic subunit of the COP9 signalosome (CSN) complex; acts as an isopeptidase in cleaving the ubiquitin-like protein Nedd8 from SCF ubiquitin ligases; metalloendopeptidase involved in the adaptation to pheromone signaling; involved in modulation of genes controlling amino acid and lipid metabolism, and ergosterol biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    68997..70319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180276.1NP_010065.2  TPA: COP9 signalosome catalytic subunit RRI1 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010065.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZXB7, D6VRD8, Q12468
    UniProtKB/TrEMBL
    C7GSW1, N1P828
    Conserved Domains (1) summary
    cd08069
    Location:62346
    MPN_RPN11_CSN5; Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5