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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 851315, updated on 2-Nov-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000002370
Locus tag
YDL211C
See related
AllianceGenome:SGD:S000002370; FungiDB:YDL211C; VEuPathDB:YDL211C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in fungal-type vacuole. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (79294..80412, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Nop6p Neighboring gene Shr3p Neighboring gene tRNA-Gly Neighboring gene Uga4p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome. She R, et al. Proc Natl Acad Sci U S A, 2017 Apr 4. PMID 28325876, Free PMC Article
  2. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article
  3. The 4E-BP Caf20p Mediates Both eIF4E-Dependent and Independent Repression of Translation. Castelli LM, et al. PLoS Genet, 2015 May. PMID 25973932, Free PMC Article
  4. Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae. Babu M, et al. Nature, 2012 Sep 27. PMID 22940862
  5. The nucleotide sequence of Saccharomyces cerevisiae chromosome IV. Jacq C, et al. Nature, 1997 May 29. PMID 9169867

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in fungal-type vacuole HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_010070.1
  • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YDL211C has a paralog, TDA7, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    79294..80412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180271.1 → NP_010070.1  TPA: uncharacterized protein YDL211C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010070.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VRE3, Q12121
    UniProtKB/TrEMBL
    A6ZXC2, B3LH91, B5VF65, N1P6B7
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q12121.1

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