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MSC2 metal cation transporter MSC2 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851786, updated on 18-Sep-2024

Summary

Official Symbol
MSC2
Official Full Name
metal cation transporter MSC2
Primary source
SGD:S000002613
Locus tag
YDR205W
See related
AllianceGenome:SGD:S000002613; FungiDB:YDR205W; VEuPathDB:YDR205W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables zinc ion transmembrane transporter activity. Involved in cellular zinc ion homeostasis; transmembrane transport; and zinc ion transport. Located in endoplasmic reticulum. Orthologous to several human genes including SLC30A7 (solute carrier family 30 member 7). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See MSC2 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (859346..861520)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Rav2p Neighboring gene ubiquinone biosynthesis protein COQ4 Neighboring gene Ebs1p Neighboring gene DNA-binding transcriptional regulator UME6

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
enables zinc ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables zinc ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in inorganic ion homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular monoatomic cation homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular zinc ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular zinc ion homeostasis IEA
Inferred from Electronic Annotation
more info
 
involved_in intracellular zinc ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in zinc ion import into Golgi lumen IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in zinc ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in zinc ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in Golgi apparatus IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cytoplasmic vesicle IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum HDA PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
metal cation transporter MSC2
NP_010491.4
  • Endoplasmic reticulum zinc transporter; part of a heterodimeric transporter with Zrg17p that transfers zinc from the cytosol to the ER lumen; member of the cation diffusion facilitator family of efflux pumps; localizes to ER and nucleus; mutations affect the cellular distribution of zinc and also confer defects in meiotic recombination between homologous chromatids

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    859346..861520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180513.3NP_010491.4  TPA: metal cation transporter MSC2 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010491.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VSI6, Q03455
    UniProtKB/TrEMBL
    C7GMZ4, N1P6U4
    Conserved Domains (1) summary
    COG1230
    Location:378673
    CzcD; Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]