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FRQ1 frequenin [ Saccharomyces cerevisiae S288C ]

Gene ID: 851979, updated on 18-Sep-2024

Summary

Official Symbol
FRQ1
Official Full Name
frequenin
Primary source
SGD:S000002781
Locus tag
YDR373W
See related
AllianceGenome:SGD:S000002781; FungiDB:YDR373W; VEuPathDB:YDR373W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables enzyme activator activity. Involved in positive regulation of 1-phosphatidylinositol 4-kinase activity and regulation of signal transduction. Located in Golgi membrane. Human ortholog(s) of this gene implicated in cone-rod dystrophy 14; retinitis pigmentosa 48; and torsion dystonia 2. Orthologous to several human genes including NCS1 (neuronal calcium sensor 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See FRQ1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (1222759..1223331)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene putative chitinase Neighboring gene Vps74p Neighboring gene mRNA-binding phosphate metabolism regulator Neighboring gene Wip1p

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables calcium ion binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables enzyme activator activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in cellular bud membrane IEA
Inferred from Electronic Annotation
more info
 
located_in cytosol HDA PubMed 
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
frequenin
NP_010661.3
  • N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    1222759..1223331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180681.3NP_010661.3  TPA: frequenin [Saccharomyces cerevisiae S288C]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VT04, Q06389
    UniProtKB/TrEMBL
    A6ZYX1, B3LFT0, B5VGQ3, C7GMG4, C8Z5T5, G2WBA9, N1P7A6
    Conserved Domains (1) summary
    COG5126
    Location:4179
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]