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RPL23A ribosomal 60S subunit protein L23A [ Saccharomyces cerevisiae S288C ]

Gene ID: 852191, updated on 4-Aug-2024

Summary

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Gene symbol
RPL23A
Gene description
ribosomal 60S subunit protein L23A
Primary source
FungiDB:YBL087C
Locus tag
YBL087C
See related
SGD:S000000183; AllianceGenome:SGD:S000000183; VEuPathDB:YBL087C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable large ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Part of cytosolic large ribosomal subunit. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RPL23A in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_001134.8 (59822..60739, complement)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene amino acid transporter Neighboring gene DNA-binding protein kinase TEL1 Neighboring gene uncharacterized protein Neighboring gene Boi1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The crystal structure of protein-transporting chaperone BCP1 from Saccharomyces cerevisiae. Lin MH, et al. J Struct Biol, 2020 Oct 1. PMID 32805410
  2. Yeast ribosomal/cytochrome c SET domain methyltransferase subfamily: identification of Rpl23ab methylation sites and recognition motifs. Porras-Yakushi TR, et al. J Biol Chem, 2007 Apr 27. PMID 17327221
  3. A novel SET domain methyltransferase modifies ribosomal protein Rpl23ab in yeast. Porras-Yakushi TR, et al. J Biol Chem, 2005 Oct 14. PMID 16096273
  4. YKE4 (YIL023C) encodes a bidirectional zinc transporter in the endoplasmic reticulum of Saccharomyces cerevisiae. Kumánovics A, et al. J Biol Chem, 2006 Aug 11. PMID 16760462
  5. Bcp1 Is the Nuclear Chaperone of Rpl23 in Saccharomyces cerevisiae. Ting YH, et al. J Biol Chem, 2017 Jan 13. PMID 27913624, Free PMC Article

See all (111) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables large ribosomal subunit rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IC
Inferred by Curator
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation IC
Inferred by Curator
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic large ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal 60S subunit protein L23A
NP_009466.1
  • Ribosomal 60S subunit protein L23A; homologous to mammalian ribosomal protein L23 and bacterial L14; RPL23A has a paralog, RPL23B, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    59822..60739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178327.1 → NP_009466.1  TPA: ribosomal 60S subunit protein L23A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009466.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DM23, P04451, P0CX41, P0CX42
    UniProtKB/TrEMBL
    A6ZKL6, B3LNL8, C8Z3V8, G2W8S6, N1P744
    Conserved Domains (1) summary
    PTZ00054
    Location:5 → 137
    PTZ00054; 60S ribosomal protein L23; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CX41.1
P0CX42.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials
Miscellaneous