U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

APD1 Apd1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852448, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
APD1
Official Full Name
Apd1p
Primary source
SGD:S000000355
Locus tag
YBR151W
See related
AllianceGenome:SGD:S000000355; FungiDB:YBR151W; VEuPathDB:YBR151W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytosol. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See APD1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (545028..545978)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene D-arabinose 1-dehydrogenase (NAD(P)(+)) ARA1 Neighboring gene Tbs1p Neighboring gene U4/U6-U5 snRNP complex subunit SPP381 Neighboring gene 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Apd1 and Aim32 Are Prototypes of Bishistidinyl-Coordinated Non-Rieske [2Fe-2S] Proteins. Stegmaier K, et al. J Am Chem Soc, 2019 Apr 10. PMID 30879301
  2. Loss of APD1 in yeast confers hydroxyurea sensitivity suppressed by Yap1p transcription factor. Tang HM, et al. Sci Rep, 2015 Jan 20. PMID 25600293, Free PMC Article
  3. Functional analysis of 150 deletion mutants in Saccharomyces cerevisiae by a systematic approach. Entian KD, et al. Mol Gen Genet, 1999 Dec. PMID 10628851
  4. Integrating Rio1 activities discloses its nutrient-activated network in Saccharomyces cerevisiae. Iacovella MG, et al. Nucleic Acids Res, 2018 Sep 6. PMID 30011030, Free PMC Article
  5. Yeast Saccharomyces cerevisiae adiponectin receptor homolog Izh2 is involved in the regulation of zinc, phospholipid and pH homeostasis. Mattiazzi Ušaj M, et al. Metallomics, 2015 Sep. PMID 26067383

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus HDA PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Apd1p
NP_009709.1
  • 2Fe-2S cytosolic hypothetical protein; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; green fluorescent protein (GFP)-fusion protein localizes to both the nucleus and the cytoplasm; homologous to AIM32

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    545028..545978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178499.1 → NP_009709.1  TPA: Apd1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009709.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQE6, P38281
    UniProtKB/TrEMBL
    A6ZL93, B3LN08, C7GUV3, D3UEP5, G2W9F3, N1P899
    Conserved Domains (1) summary
    pfam06999
    Location:70 → 309
    Suc_Fer-like; Sucrase/ferredoxin-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38281.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools