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RPS9B ribosomal 40S subunit protein S9B [ Saccharomyces cerevisiae S288C ]

Gene ID: 852487, updated on 7-Jul-2024

Summary

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Gene symbol
RPS9B
Gene description
ribosomal 40S subunit protein S9B
Primary source
FungiDB:YBR189W
Locus tag
YBR189W
See related
SGD:S000000393; AllianceGenome:SGD:S000000393; VEuPathDB:YBR189W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
RPS13A; SUP46
Summary
A structural constituent of ribosome. Involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and positive regulation of translational fidelity. Part of cytosolic small ribosomal subunit and small-subunit processome. Orthologous to human RPS9 (ribosomal protein S9). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RPS9B in Genome Data Viewer
Location:
chromosome: II
Exon count:
2
Sequence:
Chromosome: II; NC_001134.8 (604508..605508)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene putative ribosome biosynthesis protein GDT1 Neighboring gene Ntc20p Neighboring gene ribosomal 60S subunit protein L21A Neighboring gene Rim2p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Altered ribosomal protein S11 from the SUP46 suppressor of yeast. Ishiguro J, et al. J Mol Biol, 1981 Apr 15. PMID 7031259
  2. Misreading of the ribosomal suppressor SUP46 due to an altered 40 S subunit in yeast. Masurekar M, et al. J Mol Biol, 1981 Apr 15. PMID 7031258
  3. Serine insertion caused by the ribosomal suppressor SUP46 in yeast. Ono BI, et al. J Mol Biol, 1981 Apr 15. PMID 6273576
  4. Introns regulate the production of ribosomal proteins by modulating splicing of duplicated ribosomal protein genes. Petibon C, et al. Nucleic Acids Res, 2016 May 5. PMID 26945043, Free PMC Article
  5. Genome-wide polysomal analysis of a yeast strain with mutated ribosomal protein S9. Pnueli L, et al. BMC Genomics, 2007 Aug 21. PMID 17711575, Free PMC Article

See all (121) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables rRNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in positive regulation of translational fidelity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
  
involved_in ribosomal small subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of 90S preribosome HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  
located_in organelle IEA
Inferred from Electronic Annotation
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  
part_of small-subunit processome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
ribosomal 40S subunit protein S9B
NP_009748.3
  • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9B has a paralog, RPS9A, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    604508..605508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178537.3 → NP_009748.3  TPA: ribosomal 40S subunit protein S9B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009748.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQI4, P05755
    UniProtKB/TrEMBL
    N1P8D7
    Conserved Domains (1) summary
    PTZ00155
    Location:1 → 180
    PTZ00155; 40S ribosomal protein S9; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P05755.4

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