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HAB1 Hab1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 852588, updated on 2-Nov-2024

Summary

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Official Symbol
HAB1
Official Full Name
Hab1p
Primary source
SGD:S000000489
Locus tag
YBR285W
See related
AllianceGenome:SGD:S000000489; FungiDB:YBR285W; VEuPathDB:YBR285W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables ribosome binding activity. Involved in autophagy. Is active in autophagosome. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See HAB1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (773922..774356)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene Ssh1p Neighboring gene metallo-dependent hydrolase superfamily protein Neighboring gene aminopeptidase Y Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation of null alleles for the functional analysis of six genes from the right arm of Saccharomyces cerevisiae chromosome II. Dueñas E, et al. Yeast, 1999 May. PMID 10341424
  2. Substrate specificity analysis of protein kinase complex Dbf2-Mob1 by peptide library and proteome array screening. Mah AS, et al. BMC Biochem, 2005 Oct 21. PMID 16242037, Free PMC Article
  3. Oxidant-induced cell-cycle delay in Saccharomyces cerevisiae: the involvement of the SWI6 transcription factor. Fong CS, et al. FEMS Yeast Res, 2008 May. PMID 18205808
  4. Receptor-mediated cargo hitchhiking on bulk autophagy. Takeda E, et al. EMBO J, 2024 Aug. PMID 38755257, Free PMC Article
  5. Heterozygous yeast deletion collection screens reveal essential targets of Hsp90. Franzosa EA, et al. PLoS One, 2011. PMID 22140548, Free PMC Article

See all (14) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables ribosome binding IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in autophagosome IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Hab1p
NP_009844.4
  • Autophagy receptor; highly enriched in autophagic body fractions of both rapamycin-treated and nitrogen-starved cells; binds directly to forming isolation membranes during bulk autophagy; small protein of 144 amino acid residues without any identifiable membrane-spanning regions; N-terminal 42 amino acid region contains an amphipathic helix and an Atg8-family interacting motif

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    773922..774356
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178633.4 → NP_009844.4  TPA: Hab1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009844.4

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQT0, P38354, P89508, Q6B2Z4
    UniProtKB/TrEMBL
    A6ZLM3, B3LMM8, C7GMU7, D3UF32, G2W9T8, N1P8W2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38354.2

Gene LinkOut

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