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ABCC11 ATP binding cassette subfamily C member 11 [ Homo sapiens (human) ]

Gene ID: 85320, updated on 11-Apr-2024

Summary

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Official Symbol
ABCC11provided by HGNC
Official Full Name
ATP binding cassette subfamily C member 11provided by HGNC
Primary source
HGNC:HGNC:14639
See related
Ensembl:ENSG00000121270 MIM:607040; AllianceGenome:HGNC:14639
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
WW; EWWD; MRP8
Summary
The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This ABC full transporter is a member of the MRP subfamily which is involved in multi-drug resistance. The product of this gene participates in physiological processes involving bile acids, conjugated steroids, and cyclic nucleotides. In addition, a SNP in this gene is responsible for determination of human earwax type. This gene and family member ABCC12 are determined to be derived by duplication and are both localized to chromosome 16q12.1. Multiple alternatively spliced transcript variants have been described for this gene. [provided by RefSeq, Jul 2008]
Expression
Biased expression in testis (RPKM 1.2), prostate (RPKM 0.5) and 3 other tissues See more
Orthologs
all
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Genomic context

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See ABCC11 in Genome Data Viewer
Location:
16q12.1
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (48164819..48247539, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (53961650..54046163, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (48199684..48281450, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10789 Neighboring gene ATP binding cassette subfamily C member 12 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:48150856-48151718 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:48156892-48158091 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:48191888-48193087 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:48198931-48199432 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:48199433-48199932 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7452 Neighboring gene Sharpr-MPRA regulatory region 3115 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10791 Neighboring gene lon peptidase 2, peroxisomal Neighboring gene NANOG hESC enhancer GRCh37_chr16:48317173-48317699 Neighboring gene Sharpr-MPRA regulatory region 13528 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:48353112-48353734 Neighboring gene NANOG hESC enhancer GRCh37_chr16:48370410-48370911 Neighboring gene ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 8 Neighboring gene H3K27ac hESC enhancer GRCh37_chr16:48399426-48400088 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:48411713-48412214 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7454 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7455 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7456 Neighboring gene siah E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Association Between Earwax-Determinant Genotypes and Acquired Middle Ear Cholesteatoma in a Japanese Population. Hara S, et al. Otolaryngol Head Neck Surg, 2022 Jan. PMID 33722103
  2. Mutation differences in circulating tumor DNAs from non-small cell lung cancer patients between Uygur and Han populations. Wang Y, et al. Medicine (Baltimore), 2021 Jan 29. PMID 33530206, Free PMC Article
  3. Expression of ATP-binding Cassette Transporter 11 (ABCC11) Protein in Colon Cancer. Yamada Y, et al. Anticancer Res, 2020 Oct. PMID 32988860
  4. A functional single nucleotide polymorphism in ABCC11, rs17822931, is associated with the risk of breast cancer in Japanese. Ishiguro J, et al. Carcinogenesis, 2019 Jun 10. PMID 30883634
  5. A Novel Association between the 27-bp Deletion and 538G>A Mutation in the ABCC11 Gene. Hori YS, et al. Hum Biol, 2017 Oct. PMID 30047321

See all (64) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Founder genetic variants of ABCC4 and ABCC11 in the Japanese population are not associated with the development of subacute myelo-optico-neuropathy (SMON).
    Title: Founder genetic variants of ABCC4 and ABCC11 in the Japanese population are not associated with the development of subacute myelo-optico-neuropathy (SMON).
  2. Association of HLA-DPB1, NLRP10, OVOL1, and ABCC11 with the axillary microbiome in a Japanese population.
    Title: Association of HLA-DPB1, NLRP10, OVOL1, and ABCC11 with the axillary microbiome in a Japanese population.
  3. Association Between Earwax-Determinant Genotypes and Acquired Middle Ear Cholesteatoma in a Japanese Population.
    Title: Association Between Earwax-Determinant Genotypes and Acquired Middle Ear Cholesteatoma in a Japanese Population.
  4. MRP8/14 mediates macrophage efferocytosis through RAGE and Gas6/MFG-E8, and induces polarization via TLR4-dependent pathway.
    Title: MRP8/14 mediates macrophage efferocytosis through RAGE and Gas6/MFG-E8, and induces polarization via TLR4-dependent pathway.
  5. Mutation differences in circulating tumor DNAs from non-small cell lung cancer patients between Uygur and Han populations.
    Title: Mutation differences in circulating tumor DNAs from non-small cell lung cancer patients between Uygur and Han populations.
  6. Expression of ATP-binding Cassette Transporter 11 (ABCC11) Protein in Colon Cancer.
    Title: Expression of ATP-binding Cassette Transporter 11 (ABCC11) Protein in Colon Cancer.
  7. Rs17822931, a functional single nucleotide polymorphism (SNP) in ABCC11, may play a role in the carcinogenesis.
    Title: A functional single nucleotide polymorphism in ABCC11, rs17822931, is associated with the risk of breast cancer in Japanese.
  8. here were significant differences in SNPs at rs1256061 of estrogen receptor beta gene and rs17822931, rs16945916 and rs62058521 in ABCC11 gene between the axillary osmidrosis patients and normal people
    Title: [Correlation between estrogen receptor β and ABCC11 gene single nucleotide polymorphisms and axillary osmidrosis].
  9. the differential expression pattern of ABCC11 and ABCB5 genes may serve as outliers, potentially associated with incidence of multifocal/multicentric breast cancer
    Title: Study of differential gene expression between invasive multifocal/ multicentric and unifocal breast cancer.
  10. The previous findings of a previously unreported homozygous genotype for both the Delta27 and A alleles suggest that the Delta27 deletion might have occurred in the A allele of ABCC11 gene with the 538G>A mutation.
    Title: A Novel Association between the 27-bp Deletion and 538G>A Mutation in the ABCC11 Gene.
Submit: New GeneRIF Correction See all GeneRIFs (49)

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Associated conditions

Description Tests
Apocrine gland secretion, variation in
MedGen: C1861696 OMIM: 117800 GeneReviews: Not available
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EBI GWAS Catalog

Description
Genome-wide association meta-analysis identifies novel variants associated with fasting plasma glucose in East Asians.
EBI GWAS Catalog

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ABC-type bile acid transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ABC-type glutathione S-conjugate transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ABC-type xenobiotic transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATPase-coupled inorganic anion transmembrane transporter activity TAS
Traceable Author Statement
more info
  
enables ATPase-coupled transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables organic anion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables organic anion transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables purine nucleotide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables purine nucleotide transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid and bile salt transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in leukotriene transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in organic anion transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in organic anion transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in purine nucleotide transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in transmembrane transport TAS
Traceable Author Statement
more info
  
involved_in xenobiotic transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytoplasmic vesicle membrane IEA
Inferred from Electronic Annotation
more info
  
located_in extracellular exosome HDA PubMed 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
  
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ATP-binding cassette sub-family C member 11
Names
ATP-binding cassette protein C11
ATP-binding cassette transporter MRP8
ATP-binding cassette transporter sub-family C member 11
ATP-binding cassette, sub-family C (CFTR/MRP), member 11
multi-resistance protein 8
multidrug resistance-associated protein 8
NP_001357425.1
NP_001357426.1
NP_115972.2
NP_149163.2
NP_660187.1
XP_011521700.1
XP_016879286.1
XP_016879287.1
XP_016879288.1
XP_016879289.1
XP_016879290.1
XP_016879291.1
XP_024306243.1
XP_047290774.1
XP_054170187.1
XP_054170188.1
XP_054170189.1
XP_054170190.1
XP_054170191.1
XP_054170192.1
XP_054170193.1
XP_054170194.1
XP_054170195.1
XP_054170196.1
XP_054170197.1
XP_054170198.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_011522.2 RefSeqGene

    Range
    5000..86766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001370496.1 → NP_001357425.1  ATP-binding cassette sub-family C member 11 isoform c

    Status: REVIEWED

    Source sequence(s)
    AC007600, AC096996
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1373
    PLN03130; ABC transporter C family member; Provisional

  2. NM_001370497.1 → NP_001357426.1  ATP-binding cassette sub-family C member 11 isoform a

    Status: REVIEWED

    Source sequence(s)
    AC007600, AC096996
    Consensus CDS
    CCDS10732.1
    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Related
    ENSP00000349017.2, ENST00000356608.7
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  3. NM_032583.4 → NP_115972.2  ATP-binding cassette sub-family C member 11 isoform a

    See identical proteins and their annotated locations for NP_115972.2

    Status: REVIEWED

    Source sequence(s)
    AC007600, AC096996
    Consensus CDS
    CCDS10732.1
    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  4. NM_033151.4 → NP_149163.2  ATP-binding cassette sub-family C member 11 isoform a

    See identical proteins and their annotated locations for NP_149163.2

    Status: REVIEWED

    Source sequence(s)
    AC007600, AC096996
    Consensus CDS
    CCDS10732.1
    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Related
    ENSP00000378230.1, ENST00000394747.5
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  5. NM_145186.3 → NP_660187.1  ATP-binding cassette sub-family C member 11 isoform b

    See identical proteins and their annotated locations for NP_660187.1

    Status: REVIEWED

    Source sequence(s)
    AC007600, AC096996
    Consensus CDS
    CCDS10733.1
    Related
    ENSP00000311326.6, ENST00000353782.9
    Conserved Domains (4) summary
    cd03244
    Location:1139 → 1321
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:517 → 709
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:85 → 1319
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:810 → 1087
    ABC_membrane; ABC transporter transmembrane region

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    48164819..48247539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017023798.3 → XP_016879287.1  ATP-binding cassette sub-family C member 11 isoform X1

    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  2. XM_017023797.3 → XP_016879286.1  ATP-binding cassette sub-family C member 11 isoform X1

    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Related
    ENSP00000378231.1, ENST00000394748.5
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  3. XM_017023801.3 → XP_016879290.1  ATP-binding cassette sub-family C member 11 isoform X2

  4. XM_017023800.3 → XP_016879289.1  ATP-binding cassette sub-family C member 11 isoform X1

    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  5. XM_017023799.3 → XP_016879288.1  ATP-binding cassette sub-family C member 11 isoform X1

    UniProtKB/Swiss-Prot
    Q8TDJ0, Q96J66, Q96JA6, Q9BX80
    Conserved Domains (1) summary
    PLN03130
    Location:85 → 1371
    PLN03130; ABC transporter C family member; Provisional

  6. XM_024450475.2 → XP_024306243.1  ATP-binding cassette sub-family C member 11 isoform X3

    Conserved Domains (1) summary
    PLN03130
    Location:16 → 1052
    PLN03130; ABC transporter C family member; Provisional

  7. XM_017023802.3 → XP_016879291.1  ATP-binding cassette sub-family C member 11 isoform X3

    Conserved Domains (1) summary
    PLN03130
    Location:16 → 1052
    PLN03130; ABC transporter C family member; Provisional

  8. XM_011523398.4 → XP_011521700.1  ATP-binding cassette sub-family C member 11 isoform X5

    Conserved Domains (4) summary
    cd03244
    Location:516 → 736
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    COG1132
    Location:185 → 753
    MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
    cl00549
    Location:187 → 464
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:1 → 86
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  9. XM_047434818.1 → XP_047290774.1  ATP-binding cassette sub-family C member 11 isoform X4

RNA

  1. XR_007064925.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    53961650..54046163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054314218.1 → XP_054170193.1  ATP-binding cassette sub-family C member 11 isoform X1

  2. XM_054314214.1 → XP_054170189.1  ATP-binding cassette sub-family C member 11 isoform X1

  3. XM_054314216.1 → XP_054170191.1  ATP-binding cassette sub-family C member 11 isoform X1

  4. XM_054314219.1 → XP_054170194.1  ATP-binding cassette sub-family C member 11 isoform X2

  5. XM_054314212.1 → XP_054170187.1  ATP-binding cassette sub-family C member 11 isoform X1

  6. XM_054314215.1 → XP_054170190.1  ATP-binding cassette sub-family C member 11 isoform X1

  7. XM_054314217.1 → XP_054170192.1  ATP-binding cassette sub-family C member 11 isoform X1

  8. XM_054314213.1 → XP_054170188.1  ATP-binding cassette sub-family C member 11 isoform X1

  9. XM_054314221.1 → XP_054170196.1  ATP-binding cassette sub-family C member 11 isoform X3

  10. XM_054314220.1 → XP_054170195.1  ATP-binding cassette sub-family C member 11 isoform X3

  11. XM_054314223.1 → XP_054170198.1  ATP-binding cassette sub-family C member 11 isoform X5

  12. XM_054314222.1 → XP_054170197.1  ATP-binding cassette sub-family C member 11 isoform X4

RNA

  1. XR_008484745.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96J66.1 GenPept UniProtKB/Swiss-Prot:Q96J66

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