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PAU12 seripauperin PAU12 [ Saccharomyces cerevisiae S288C ]

Gene ID: 853210, updated on 2-Nov-2024

Summary

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Official Symbol
PAU12
Official Full Name
seripauperin PAU12
Primary source
SGD:S000003526
Locus tag
YGR294W
See related
AllianceGenome:SGD:S000003526; FungiDB:YGR294W; VEuPathDB:YGR294W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Predicted to be located in membrane. Predicted to be active in fungal-type cell wall. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See PAU12 in Genome Data Viewer
Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_001139.9 (1080306..1080668)

Chromosome VII - NC_001139.9Genomic Context describing neighboring genes Neighboring gene alpha-glucoside permease Neighboring gene alpha-glucosidase MAL12 Neighboring gene Cos6p Neighboring gene Y' element ATP-dependent helicase protein 1 copy 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001139.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Functional analyses of PAU genes in Saccharomyces cerevisiae. Luo Z, et al. Microbiology (Reading), 2009 Dec. PMID 19762443
  2. Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Fisk DG, et al. Yeast, 2006 Sep. PMID 17001629, Free PMC Article
  3. Utilising established SDL-screening methods as a tool for the functional genomic characterisation of model and non-model organisms. Usher J, et al. FEMS Yeast Res, 2015 Dec. PMID 26472754
  4. Navigating the chaperone network: an integrative map of physical and genetic interactions mediated by the hsp90 chaperone. Zhao R, et al. Cell, 2005 Mar 11. PMID 15766533
  5. Association of yeast Upf1p with direct substrates of the NMD pathway. Johansson MJ, et al. Proc Natl Acad Sci U S A, 2007 Dec 26. PMID 18087042, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables structural constituent of cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in fungal-type cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in fungal-type cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
seripauperin PAU12
NP_011810.1
  • hypothetical protein; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to both the endoplasmic reticulum and vacuole

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001139.9 Reference assembly

    Range
    1080306..1080668
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181423.1 → NP_011810.1  TPA: seripauperin PAU12 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011810.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VV68, P53343
    UniProtKB/TrEMBL
    A6ZLP0, A6ZUU6, B3LML2, G2W9V4, G2WF19
    Conserved Domains (1) summary
    pfam00660
    Location:26 → 115
    SRP1_TIP1; Seripauperin and TIP1 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53343.1

Gene LinkOut

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