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RSM22 tRNA methyltransferase RSM22 [ Saccharomyces cerevisiae S288C ]

Gene ID: 853701, updated on 2-Nov-2024

Summary

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Official Symbol
RSM22
Official Full Name
tRNA methyltransferase RSM22
Primary source
SGD:S000001638
Locus tag
YKL155C
See related
AllianceGenome:SGD:S000001638; FungiDB:YKL155C; VEuPathDB:YKL155C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
A structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Located in mitochondrion. Part of mitochondrial small ribosomal subunit. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See RSM22 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (159456..161342, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene metallo-aminopeptidase Neighboring gene ribosomal 40S subunit protein S27A Neighboring gene Signal recognition particle receptor subunit beta Neighboring gene tRNA-Arg

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001143.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression and analysis of the SAM-dependent RNA methyltransferase Rsm22 from Saccharomyces cerevisiae. Alam J, et al. Acta Crystallogr D Struct Biol, 2021 Jun 1. PMID 34076597, Free PMC Article
  2. Deletion of a subgroup of ribosome-related genes minimizes hypoxia-induced changes and confers hypoxia tolerance. Shah AN, et al. Physiol Genomics, 2011 Jul 27. PMID 21586670, Free PMC Article
  3. ATG18 and FAB1 are involved in dehydration stress tolerance in Saccharomyces cerevisiae. López-Martínez G, et al. PLoS One, 2015. PMID 25803831, Free PMC Article
  4. Probabilistic approach to predicting substrate specificity of methyltransferases. Szczepińska T, et al. PLoS Comput Biol, 2014 Mar. PMID 24651469, Free PMC Article
  5. Multiple Motif Scanning to identify methyltransferases from the yeast proteome. Petrossian TC, et al. Mol Cell Proteomics, 2009 Jul. PMID 19351663, Free PMC Article

See all (53) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation IC
Inferred by Curator
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of mitochondrial small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
located_in mitochondrion HDA PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
tRNA methyltransferase RSM22
NP_012767.1
  • Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent RNA methyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    159456..161342 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179721.1 → NP_012767.1  TPA: tRNA methyltransferase RSM22 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012767.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VX43, P36056
    UniProtKB/TrEMBL
    A6ZZG8, B3LQU7, B5VM09, C7GT78, C8ZC20, N1P0P5
    Conserved Domains (1) summary
    COG5459
    Location:43 → 628
    Rsm22; Ribosomal protein RSM22 (predicted mitochondrial rRNA methylase) [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P36056.1

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