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OCT1 metalloendopeptidase [ Saccharomyces cerevisiae S288C ]

Gene ID: 853724, updated on 18-Sep-2024

Summary

Official Symbol
OCT1
Official Full Name
metalloendopeptidase
Primary source
SGD:S000001617
Locus tag
YKL134C
See related
AllianceGenome:SGD:S000001617; FungiDB:YKL134C; VEuPathDB:YKL134C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables metalloendopeptidase activity. Involved in cellular iron ion homeostasis; protein processing involved in protein targeting to mitochondrion; and protein stabilization. Located in mitochondrial matrix. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 31. Orthologous to human MIPEP (mitochondrial intermediate peptidase). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See OCT1 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (189124..191442, complement)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Cmc1p Neighboring gene Apl2p Neighboring gene Rci50p Neighboring gene putative tetrahydrofolate synthase

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metalloendopeptidase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metalloendopeptidase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables metallopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in intracellular iron ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peptide metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein processing involved in protein targeting to mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein processing involved in protein targeting to mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in protein stabilization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial matrix IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
metalloendopeptidase
NP_012788.2
  • Mitochondrial intermediate peptidase; cleaves destabilizing N-terminal residues of a subset of proteins upon import, after their cleavage by mitochondrial processing peptidase (Mas1p-Mas2p); may contribute to mitochondrial iron homeostasis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    189124..191442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179700.2NP_012788.2  TPA: metalloendopeptidase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012788.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VX62, P35999, P51980
    UniProtKB/TrEMBL
    B3LQW6, C7GVI2, N1P0Q9
    Conserved Domains (1) summary
    cd06457
    Location:76763
    M3A_MIP; Peptidase M3 mitochondrial intermediate peptidase (MIP)