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NIT1 Nit1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854642, updated on 2-Nov-2024

Summary

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Official Symbol
NIT1
Official Full Name
Nit1p
Primary source
SGD:S000001426
Locus tag
YIL164C
See related
AllianceGenome:SGD:S000001426; FungiDB:YIL164C; VEuPathDB:YIL164C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable nitrilase activity. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See NIT1 in Genome Data Viewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (34087..34686, complement)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Soa1p Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene beta-fructofuranosidase SUC2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Effect of 21 different nitrogen sources on global gene expression in the yeast Saccharomyces cerevisiae. Godard P, et al. Mol Cell Biol, 2007 Apr. PMID 17308034, Free PMC Article
  2. Tup1-Ssn6 and Swi-Snf remodelling activities influence long-range chromatin organization upstream of the yeast SUC2 gene. Fleming AB, et al. Nucleic Acids Res, 2007. PMID 17704134, Free PMC Article
  3. Sequencing and comparison of yeast species to identify genes and regulatory elements. Kellis M, et al. Nature, 2003 May 15. PMID 12748633
  4. Crystal structure of the worm NitFhit Rosetta Stone protein reveals a Nit tetramer binding two Fhit dimers. Pace HC, et al. Curr Biol, 2000 Jul 27-Aug 10. PMID 10959838
  5. Exploring Quantitative Yeast Phenomics with Single-Cell Analysis of DNA Damage Foci. Styles EB, et al. Cell Syst, 2016 Sep 28. PMID 27617677, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables nitrilase activity IEA
Inferred from Electronic Annotation
more info
  
enables nitrilase activity ISA
Inferred from Sequence Alignment
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Nit1p
NP_012102.1
  • Nitrilase; member of the nitrilase branch of the nitrilase superfamily; in closely related species and other S. cerevisiae strain backgrounds YIL164C and adjacent ORF, YIL165C, likely constitute a single ORF encoding a nitrilase gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    34087..34686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179512.1 → NP_012102.1  TPA: Nit1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012102.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VVC3, P40447, Q05729, Q6Q5A1
    UniProtKB/TrEMBL
    B5VKF0, G2WFY7, N1P9A2
    Conserved Domains (1) summary
    cl11424
    Location:4 → 198
    nitrilase; Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40447.1

Gene LinkOut

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