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RRT14 Rrt14p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854679, updated on 18-Sep-2024

Summary

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Official Symbol
RRT14
Official Full Name
Rrt14p
Primary source
SGD:S000001389
Locus tag
YIL127C
See related
AllianceGenome:SGD:S000001389; FungiDB:YIL127C; VEuPathDB:YIL127C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in nucleolus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RRT14 in Genome Data Viewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (117024..117644, complement)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Tao3p Neighboring gene Met18p Neighboring gene RSC chromatin remodeling complex ATPase subunit STH1 Neighboring gene alpha-ketoglutarate dehydrogenase KGD1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Wade CH, et al. Yeast, 2006 Mar. PMID 16544271
  2. Genetic identification of factors that modulate ribosomal DNA transcription in Saccharomyces cerevisiae. Hontz RD, et al. Genetics, 2009 May. PMID 19270272, Free PMC Article
  3. Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome. Zhao Y, et al. Commun Biol, 2022 Jun 1. PMID 35650250, Free PMC Article
  4. The Genetic and Physical Interactomes of the Saccharomyces cerevisiae Hrq1 Helicase. Rogers CM, et al. G3 (Bethesda), 2020 Dec 3. PMID 33115721, Free PMC Article
  5. Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Lau B, et al. Mol Cell, 2021 Jan 21. PMID 33326748

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleolus HDA PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Rrt14p
NP_012139.1
  • hypothetical protein; identified in a screen for mutants with decreased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    117024..117644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179475.1 → NP_012139.1  TPA: Rrt14p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012139.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B5VKI1, D6VVG0, P40470
    Conserved Domains (1) summary
    pfam17075
    Location:6 → 196
    RRT14; Regular of rDNA transcription protein 14
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40470.1

Gene LinkOut

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