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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 854719, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000001351
Locus tag
YIL089W
See related
AllianceGenome:SGD:S000001351; FungiDB:YIL089W; VEuPathDB:YIL089W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in endoplasmic reticulum and fungal-type vacuole lumen. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (195599..196216)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene rRNA-binding ribosome biosynthesis protein UTP25 Neighboring gene Ice2p Neighboring gene tRNA-Glu Neighboring gene Avt7p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An overexpression screen in Saccharomyces cerevisiae identifies novel genes that affect endocytic protein trafficking. Arlt H, et al. Traffic, 2011 Nov. PMID 21777356
  2. The nucleotide sequence of Saccharomyces cerevisiae chromosome IX. Churcher C, et al. Nature, 1997 May 29. PMID 9169870
  3. A Comprehensive Analysis of Replicative Lifespan in 4,698 Single-Gene Deletion Strains Uncovers Conserved Mechanisms of Aging. McCormick MA, et al. Cell Metab, 2015 Nov 3. PMID 26456335, Free PMC Article
  4. Exploring the yeast acetylome using functional genomics. Kaluarachchi Duffy S, et al. Cell, 2012 May 11. PMID 22579291, Free PMC Article
  5. A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis. Makrantoni V, et al. G3 (Bethesda), 2017 Sep 7. PMID 28754723, Free PMC Article

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
 PubMed 
located_in fungal-type vacuole HDA PubMed 
located_in fungal-type vacuole lumen IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisome HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_012177.1
  • hypothetical protein found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    195599..196216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179437.1 → NP_012177.1  TPA: uncharacterized protein YIL089W [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012177.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VVJ8, P40500
    UniProtKB/TrEMBL
    G2WG63
    Conserved Domains (1) summary
    pfam15701
    Location:29 → 190
    DUF4668; Domain of unknown function (DUF4668)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40500.1

Gene LinkOut

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