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TIR3 Tir3p [ Saccharomyces cerevisiae S288C ]

Gene ID: 854804, updated on 2-Nov-2024

Summary

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Official Symbol
TIR3
Official Full Name
Tir3p
Primary source
SGD:S000001273
Locus tag
YIL011W
See related
AllianceGenome:SGD:S000001273; FungiDB:YIL011W; VEuPathDB:YIL011W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
YIB1
Summary
Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Located in fungal-type cell wall. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See TIR3 in Genome Data Viewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (333727..334536)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette multidrug transporter PDR11 Neighboring gene uncharacterized protein Neighboring gene thioredoxin peroxidase DOT5 Neighboring gene telomerase subunit EST3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001141.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables structural constituent of cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in fungal-type cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
is_active_in fungal-type cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in fungal-type cell wall IDA
Inferred from Direct Assay
more info
 PubMed 
located_in fungal-type vacuole HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in side of membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Tir3p
NP_012254.1
  • Cell wall mannoprotein; member of Srp1p/Tip1p family of serine-alanine-rich proteins; expressed under anaerobic conditions and required for anaerobic growth; TIR3 has a paralog, TIR2, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    333727..334536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179361.1 → NP_012254.1  TPA: Tir3p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012254.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VVR8, P40552
    UniProtKB/TrEMBL
    N1P0P0
    Conserved Domains (1) summary
    pfam00660
    Location:20 → 116
    SRP1_TIP1; Seripauperin and TIP1 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40552.1

Gene LinkOut

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