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RPM2 ribonuclease P [ Saccharomyces cerevisiae S288C ]

Gene ID: 854883, updated on 19-Jun-2024

Summary

Gene symbol
RPM2
Gene description
ribonuclease P
Primary source
FungiDB:YML091C
Locus tag
YML091C
See related
SGD:S000004556; AllianceGenome:SGD:S000004556; VEuPathDB:YML091C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Contributes to ribonuclease P activity. Involved in several processes, including RNA processing; cytoplasmic translation; and positive regulation of transcription by RNA polymerase II. Located in mitochondrial matrix and nucleus. Part of mitochondrial ribonuclease P complex. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See RPM2 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (87123..90731, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Utp14p Neighboring gene proteasome core particle subunit alpha 2 Neighboring gene ncRNA Neighboring gene SCF ubiquitin ligase complex subunit UFO1

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
contributes_to ribonuclease P activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ribonuclease P activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in RNA processing IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in RNA processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cytoplasmic translation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mRNA processing IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in mRNA processing IPI
Inferred from Physical Interaction
more info
PubMed 
involved_in mitochondrial tRNA 5'-end processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitochondrion organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrion organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tRNA 5'-leader removal IDA
Inferred from Direct Assay
more info
PubMed 
involved_in tRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrial matrix IDA
Inferred from Direct Assay
more info
PubMed 
part_of mitochondrial ribonuclease P complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
part_of ribonuclease P complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
ribonuclease P
NP_013619.1
  • Protein subunit of mitochondrial RNase P; has roles in nuclear transcription, cytoplasmic and mitochondrial RNA processing, and mitochondrial translation; distributed to mitochondria, cytoplasmic processing bodies, and the nucleus

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    87123..90731 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182450.1NP_013619.1  TPA: ribonuclease P [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013619.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W0J4, Q02773
    UniProtKB/TrEMBL
    G2WJW6
    Conserved Domains (2) summary
    sd00004
    Location:194216
    PPR; PPR repeat [structural motif]
    pfam08579
    Location:163281
    RPM2; Mitochondrial ribonuclease P subunit (RPM2)