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RPS1B ribosomal 40S subunit protein S1B [ Saccharomyces cerevisiae S288C ]

Gene ID: 854939, updated on 3-Nov-2024

Summary

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Official Symbol
RPS1B
Official Full Name
ribosomal 40S subunit protein S1B
Primary source
SGD:S000004528
Locus tag
YML063W
See related
AllianceGenome:SGD:S000004528; FungiDB:YML063W; VEuPathDB:YML063W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
PLC2; RP10B
Summary
Predicted to be a structural constituent of ribosome. Involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Part of 90S preribosome. Orthologous to human RPS3A (ribosomal protein S3A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See RPS1B in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (146482..147249)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene origin recognition complex subunit 1 Neighboring gene Ras family GTPase TEM1 Neighboring gene Mft1p Neighboring gene DNA helicase PIF1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IGI
Inferred from Genetic Interaction
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of 90S preribosome HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal 40S subunit protein S1B
NP_013648.1
  • Ribosomal protein of the small (40S) subunit; homologous to mammalian ribosomal protein S3A, no bacterial homolog; RPS1B has a paralog, RPS1A, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    146482..147249
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182422.1 → NP_013648.1  TPA: ribosomal 40S subunit protein S1B [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013648.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZM02, B3LLJ2, B5VP69, C7GVZ9, D6VZB0, P23248
    UniProtKB/TrEMBL
    C8ZEE2, G2WJZ2, N1P675
    Conserved Domains (1) summary
    pfam01015
    Location:22 → 221
    Ribosomal_S3Ae; Ribosomal S3Ae family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23248.3

Gene LinkOut

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