U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RPS17A ribosomal 40S subunit protein S17A [ Saccharomyces cerevisiae S288C ]

Gene ID: 854984, updated on 28-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
RPS17A
Official Full Name
ribosomal 40S subunit protein S17A
Primary source
SGD:S000004486
Locus tag
YML024W
See related
AllianceGenome:SGD:S000004486; FungiDB:YML024W; VEuPathDB:YML024W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
RP51A; RPL51A
Summary
Predicted to be a structural constituent of ribosome. Involved in ribosomal small subunit assembly. Predicted to be located in cytosol and ribosome. Predicted to be part of ribonucleoprotein complex. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 4. Orthologous to human RPS17 (ribosomal protein S17). [provided by Alliance of Genome Resources, Oct 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RPS17A in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
2
Sequence:
Chromosome: XIII; NC_001145.3 (225889..226697)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene ribosomal 40S subunit protein S18B Neighboring gene mitochondrial 54S ribosomal protein YmL6 Neighboring gene Smc5-Smc6 complex subunit NSE5 Neighboring gene adenine phosphoribosyltransferase APT1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Yeast pre-mRNA is composed of two populations with distinct kinetic properties. Elliott DJ, et al. Exp Cell Res, 1996 Dec 15. PMID 8986595
  2. Interaction between the first and last nucleotides of pre-mRNA introns is a determinant of 3' splice site selection in S. cerevisiae. Chanfreau G, et al. Nucleic Acids Res, 1994 Jun 11. PMID 8029003, Free PMC Article
  3. Posttranscriptional regulation and assembly into ribosomes of a Saccharomyces cerevisiae ribosomal protein-beta-galactosidase fusion. Gritz L, et al. Mol Cell Biol, 1985 Dec. PMID 3939318, Free PMC Article
  4. Evidence for the biochemical role of an internal sequence in yeast nuclear mRNA introns: implications for U1 RNA and metazoan mRNA splicing. Pikielny CW, et al. Cell, 1983 Sep. PMID 6616616
  5. A novel role for the 3' region of introns in pre-mRNA splicing of Saccharomyces cerevisiae. Rymond BC, et al. Genes Dev, 1987 May. PMID 3315850

See all (94) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in ribosomal small subunit assembly IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
ribosomal 40S subunit protein S17A
NP_013688.1
  • Ribosomal protein 51 (rp51) of the small (40s) subunit; homologous to mammalian ribosomal protein S17, no bacterial homolog; RPS17A has a paralog, RPS17B, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    225889..226697
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182382.1 → NP_013688.1  TPA: ribosomal 40S subunit protein S17A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013688.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZF0, P02407
    UniProtKB/TrEMBL
    A6ZM38, C8ZEI0, G2WK28, N1NY37
    Conserved Domains (1) summary
    pfam00833
    Location:1 → 115
    Ribosomal_S17e; Ribosomal S17
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P02407.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools
Miscellaneous