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putative methyltransferase [ Saccharomyces cerevisiae S288C ]

Gene ID: 855042, updated on 2-Nov-2024

Summary

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Official Full Name
putative methyltransferase
Primary source
SGD:S000004629
Locus tag
YMR027W
See related
AllianceGenome:SGD:S000004629; FungiDB:YMR027W; VEuPathDB:YMR027W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables phosphatase activity. Predicted to be involved in DNA damage response. Located in cytoplasm and nucleus. Orthologous to human ARMT1 (acidic residue methyltransferase 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (325877..327289)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Csi1p Neighboring gene ubiquitin-protein ligase peroxin 12 Neighboring gene Tap42p Neighboring gene Far8p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components. Beliakova-Bethell N, et al. RNA, 2006 Jan. PMID 16373495, Free PMC Article
  2. Investigation by atomic force microscopy of the structure of Ty3 retrotransposon particles. Kuznetsov YG, et al. J Virol, 2005 Jul. PMID 15956549, Free PMC Article
  3. Regulation of lipid droplet dynamics in Saccharomyces cerevisiae depends on the Rab7-like Ypt7p, HOPS complex and V1-ATPase. Bouchez I, et al. Biol Open, 2015 May 6. PMID 25948753, Free PMC Article
  4. Cross-compartment signal propagation in the mitotic exit network. Zhou X, et al. Elife, 2021 Jan 22. PMID 33481703, Free PMC Article
  5. A family of metal-dependent phosphatases implicated in metabolite damage-control. Huang L, et al. Nat Chem Biol, 2016 Aug. PMID 27322068, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables fructose 6-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
  
enables fructose-1-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
putative methyltransferase
NP_013740.1
  • A metal-dependent phosphatase, part of the DUF89 protein family; dephosphorylates fructose-1-phosphate; human ortholog, C6orf211 is involved in response to DNA damage; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; YMR027W is not an essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    325877..327289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182523.1 → NP_013740.1  TPA: putative methyltransferase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013740.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZK1, Q04371
    UniProtKB/TrEMBL
    C7GL92, G2WK78, N1NY73
    Conserved Domains (1) summary
    pfam01937
    Location:19 → 438
    DUF89; Protein of unknown function DUF89
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04371.1

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