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RIM9 Rim9p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855085, updated on 18-Sep-2024

Summary

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Official Symbol
RIM9
Official Full Name
Rim9p
Primary source
SGD:S000004667
Locus tag
YMR063W
See related
AllianceGenome:SGD:S000004667; FungiDB:YMR063W; VEuPathDB:YMR063W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in ascospore formation. Located in fungal-type vacuole lumen and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RIM9 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (397077..397796)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene cleavage polyadenylation factor subunit RNA14 Neighboring gene glutamate N-acetyltransferase Neighboring gene Aep1p Neighboring gene Kar5p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in saccharomyces are homologous. Denison SH, et al. Mol Microbiol, 1998 Oct. PMID 9791171
  2. Membrane protein Rim21 plays a central role in sensing ambient pH in Saccharomyces cerevisiae. Obara K, et al. J Biol Chem, 2012 Nov 9. PMID 23019326, Free PMC Article
  3. Proteolytic activation of Rim1p, a positive regulator of yeast sporulation and invasive growth. Li W, et al. Genetics, 1997 Jan. PMID 9017390, Free PMC Article
  4. The Sur7/PalI family transmembrane protein Tos7 (Yol019w) plays a role in secretion in budding yeast. Zhu J, et al. Fungal Genet Biol, 2020 Nov. PMID 33002606
  5. The pH-sensing Rim101 pathway positively regulates the transcriptional expression of the calcium pump gene PMR1 to affect calcium sensitivity in budding yeast. Yan H, et al. Biochem Biophys Res Commun, 2020 Nov 12. PMID 32891431

See all (44) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in ascospore formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cell division site IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in fungal-type vacuole lumen IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in growing cell tip IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Rim9p
NP_013779.1
  • Plasma membrane hypothetical protein; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    397077..397796
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182561.1 → NP_013779.1  TPA: Rim9p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013779.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZN7, Q04734
    UniProtKB/TrEMBL
    C8ZER5, G2WKB1
    Conserved Domains (1) summary
    pfam06687
    Location:7 → 169
    SUR7; SUR7/PalI family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04734.1

Gene LinkOut

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