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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 855115, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000004696
Locus tag
YMR090W
See related
AllianceGenome:SGD:S000004696; FungiDB:YMR090W; VEuPathDB:YMR090W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in cytoplasm. Orthologous to human BLVRB (biliverdin reductase B). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (449245..449928)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Vba1p Neighboring gene m-AAA protease subunit YTA12 Neighboring gene Npl6p Neighboring gene Aip1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insights into yeast adaptive response to the agricultural fungicide mancozeb: a toxicoproteomics approach. Santos PM, et al. Proteomics, 2009 Feb. PMID 19137554
  2. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
  3. The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII. Bowman S, et al. Nature, 1997 May 29. PMID 9169872
  4. La-motif-dependent mRNA association with Slf1 promotes copper detoxification in yeast. Schenk L, et al. RNA, 2012 Mar. PMID 22271760, Free PMC Article
  5. Distinct roles for Khd1p in the localization and expression of bud-localized mRNAs in yeast. Hasegawa Y, et al. RNA, 2008 Nov. PMID 18805955, Free PMC Article

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_013808.1
  • hypothetical protein; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    449245..449928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182590.1 → NP_013808.1  TPA: uncharacterized protein YMR090W [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013808.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZR3, Q04304
    UniProtKB/TrEMBL
    A6ZME7, B3LLY1, B5VPL6, C7GL36, C8ZEU3, G2WKD8, N1P5H9
    Conserved Domains (1) summary
    cd05243
    Location:5 → 217
    SDR_a5; atypical (a) SDRs, subgroup 5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04304.1

Gene LinkOut

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