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LDO45 Ldo45p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855178, updated on 28-Oct-2024

Summary

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Official Symbol
LDO45
Official Full Name
Ldo45p
Primary source
SGD:S000004755
Locus tag
YMR147W
See related
AllianceGenome:SGD:S000004755; FungiDB:YMR147W; VEuPathDB:YMR147W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in lipid droplet organization. Located in cell periphery. Is active in lipid droplet. [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

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See LDO45 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
2
Sequence:
Chromosome: XIII; NC_001145.3 (559199..560812)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone reductase (H(+)-translocating) NDE1 Neighboring gene translation initiation factor eIF3 subunit i Neighboring gene Ldo16p Neighboring gene dolichyl-diphosphooligosaccharide-protein glycotransferase Neighboring gene endopeptidase catalytic subunit IMP1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Scan statistics analysis for detection of introns in time-course tiling array data. Reiner-Benaim A, et al. Stat Appl Genet Mol Biol, 2014 Apr 1. PMID 24572987
  2. LDO proteins and Vac8 form a vacuole-lipid droplet contact site to enable starvation-induced lipophagy in yeast. Álvarez-Guerra I, et al. Dev Cell, 2024 Mar 25. PMID 38354739
  3. A metabolically controlled contact site between vacuoles and lipid droplets in yeast. Diep DTV, et al. Dev Cell, 2024 Mar 25. PMID 38367622
  4. Identification of seipin-linked factors that act as determinants of a lipid droplet subpopulation. Eisenberg-Bord M, et al. J Cell Biol, 2018 Jan 2. PMID 29187527, Free PMC Article
  5. Regulation of lipid droplets by metabolically controlled Ldo isoforms. Teixeira V, et al. J Cell Biol, 2018 Jan 2. PMID 29187528, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables protein-containing complex binding IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid droplet organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in lipid droplet IDA
Inferred from Direct Assay
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Ldo45p
NP_013867.2
  • hypothetical protein; SWAT-GFP and mCherry fusion proteins localize to the cell periphery

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    559199..560812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182649.2 → NP_013867.2  TPA: Ldo45p [Saccharomyces cerevisiae S288C]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZW9, P40218
Nucleotide Protein
Heading Accession and Version

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