U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TEX1 Tex1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855468, updated on 28-Oct-2024

Summary

Official Symbol
TEX1
Official Full Name
Tex1p
Primary source
SGD:S000005197
Locus tag
YNL253W
See related
AllianceGenome:SGD:S000005197; FungiDB:YNL253W; VEuPathDB:YNL253W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables mRNA binding activity. Predicted to be involved in mRNA export from nucleus. Part of transcription export complex. Orthologous to human THOC3 (THO complex subunit 3). [provided by Alliance of Genome Resources, Oct 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See TEX1 in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (170018..171286)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene mRNA-binding translational activator GIS2 Neighboring gene Rtc4p Neighboring gene mitochondrial 54S ribosomal protein YmL17/YmL30 Neighboring gene Nrd1 complex RNA-binding subunit

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables mRNA binding HDA PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mRNA export from nucleus IC
Inferred by Curator
more info
PubMed 
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of transcription export complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Tex1p
NP_014146.1
  • Protein involved in mRNA export; component of the transcription export (TREX) complex

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    170018..171286
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183091.1NP_014146.1  TPA: Tex1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014146.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W0U0, P53851
    UniProtKB/TrEMBL
    A6ZRJ0, B3LP97, C7GPA8, N1P517
    Conserved Domains (2) summary
    COG2319
    Location:1374
    WD40; WD40 repeat [General function prediction only]
    sd00039
    Location:66109
    7WD40; WD40 repeat [structural motif]