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SWS2 putative mitochondrial 37S ribosomal protein SWS2 [ Saccharomyces cerevisiae S288C ]

Gene ID: 855643, updated on 9-Jun-2024

Summary

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Gene symbol
SWS2
Gene description
putative mitochondrial 37S ribosomal protein SWS2
Primary source
FungiDB:YNL081C
Locus tag
YNL081C
See related
SGD:S000005025; AllianceGenome:SGD:S000005025; VEuPathDB:YNL081C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
uS13m
Summary
A structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Part of mitochondrial small ribosomal subunit. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See SWS2 in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (476188..476619, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Ca(2+)-binding ATP:ADP antiporter SAL1 Neighboring gene ATP-binding mismatch repair protein Neighboring gene Eos1p Neighboring gene tropomyosin TPM1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001146.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis. Swinnen S, et al. Genome Res, 2012 May. PMID 22399573, Free PMC Article
  2. Four linked genes participate in controlling sporulation efficiency in budding yeast. Ben-Ari G, et al. PLoS Genet, 2006 Nov 17. PMID 17112318, Free PMC Article
  3. Dominant Epistasis Between Two Quantitative Trait Loci Governing Sporulation Efficiency in Yeast Saccharomyces cerevisiae. Bergman J, et al. Food Technol Biotechnol, 2015 Dec. PMID 27904371, Free PMC Article
  4. Analysis of deletion phenotypes and GFP fusions of 21 novel Saccharomyces cerevisiae open reading frames. Brachat A, et al. Yeast, 2000 Feb. PMID 10649453
  5. Uncovering novel cell cycle players through the inactivation of securin in budding yeast. Sarin S, et al. Genetics, 2004 Nov. PMID 15579722, Free PMC Article

See all (43) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. MKT1, SWS2, and APJ1 are associated with high ethanol tolerance in Saccharomyces cerevisiae.
    Title: Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IDA
Inferred from Direct Assay
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in mitochondrial translation IC
Inferred by Curator
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IDA
Inferred from Direct Assay
more info
 PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
located_in peroxisome IDA
Inferred from Direct Assay
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  
part_of small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative mitochondrial 37S ribosomal protein SWS2
NP_014318.3
  • Component of mitochondrial small ribosomal subunit; similar to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2; localizes to peroxisomes in glucose-growing cells

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    476188..476619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182919.3 → NP_014318.3  TPA: putative mitochondrial 37S ribosomal protein SWS2 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014318.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W198, P53937, Q45TY3
    UniProtKB/TrEMBL
    A0A6L0YIZ4, A6ZRZ9, B3LNU0, C7GUN1, C8ZGE9, G2WM23, N1NXY8
    Conserved Domains (1) summary
    COG0099
    Location:2 → 112
    RpsM; Ribosomal protein S13 [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53937.1

Gene LinkOut

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