U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HEF3 translation elongation factor EF-3 [ Saccharomyces cerevisiae S288C ]

Gene ID: 855718, updated on 2-Nov-2024

Summary

Official Symbol
HEF3
Official Full Name
translation elongation factor EF-3
Primary source
SGD:S000004959
Locus tag
YNL014W
See related
AllianceGenome:SGD:S000004959; FungiDB:YNL014W; VEuPathDB:YNL014W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
ZRG7
Summary
Enables ATP hydrolysis activity and translation elongation factor activity. Involved in translational elongation. Located in cytosolic ribosome. [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See HEF3 in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (606319..609453)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Pub1p Neighboring gene Pbi2p Neighboring gene putative carboxylic ester hydrolase Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables ATP binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables ATP hydrolysis activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ATP hydrolysis activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
enables translation elongation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 
enables translation elongation factor activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables translation elongation factor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 
involved_in translational elongation IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytosolic ribosome IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
translation elongation factor EF-3
NP_014384.3
  • Translational elongation factor EF-3; member of the ABC superfamily; stimulates EF-1 alpha-dependent binding of aminoacyl-tRNA by the ribosome; normally expressed in zinc deficient cells; HEF3 has a paralog, YEF3, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    606319..609453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182853.3NP_014384.3  TPA: translation elongation factor EF-3 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014384.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W1G4, P53978
    UniProtKB/TrEMBL
    C7GJF2, N1P4M0
    Conserved Domains (3) summary
    COG0488
    Location:429986
    Uup; ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
    sd00044
    Location:129158
    HEAT; HEAT repeat [structural motif]
    pfam17947
    Location:336411
    4HB; Four helical bundle domain