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RLP7 Rlp7p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855730, updated on 18-Sep-2024

Summary

Official Symbol
RLP7
Official Full Name
Rlp7p
Primary source
SGD:S000004947
Locus tag
YNL002C
See related
AllianceGenome:SGD:S000004947; FungiDB:YNL002C; VEuPathDB:YNL002C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
RPL7
Summary
Enables rRNA primary transcript binding activity. Involved in exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Located in nucleolus. Part of preribosome, large subunit precursor. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See RLP7 in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (626174..627142, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene mRNA-binding protein Neighboring gene Pet8p Neighboring gene ribosome dissociation factor DOM34 Neighboring gene citrate (Si)-synthase CIT1

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables mRNA binding HDA PubMed 
enables rRNA primary transcript binding IDA
Inferred from Direct Assay
more info
PubMed 
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
part_of preribosome, large subunit precursor HDA PubMed 
part_of preribosome, large subunit precursor IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
Rlp7p
NP_014396.3
  • Nucleolar protein similar to large ribosomal subunit L7 proteins; constituent of 66S pre-ribosomal particles; plays an essential role in processing of precursors to the large ribosomal subunit RNAs; binds junction of ITS2 and ITS2-proximal stem between the 3' end of 5.8S rRNA and the 5' end of 25S rRNA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    626174..627142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182841.3NP_014396.3  TPA: Rlp7p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014396.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W1H5, P40693
    UniProtKB/TrEMBL
    B3LPP0, B5VR32, C7GJE1, C8ZFM4, N1NZN2
    Conserved Domains (1) summary
    cd01657
    Location:141322
    Ribosomal_L7_archeal_euk; Ribosomal protein L7, which is found in archaea and eukaryotes but not in prokaryotes, binds domain II of the 23S rRNA as well as the 5S rRNA and is one of five ribosomal proteins that mediate the interactions 5S rRNA makes with the ribosome. The ...