U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 855902, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
uncharacterized protein
Primary source
SGD:S000006120
Locus tag
YPL199C
See related
AllianceGenome:SGD:S000006120; FungiDB:YPL199C; VEuPathDB:YPL199C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Involved in nuclear-transcribed mRNA catabolic process, non-stop decay. Located in cell periphery and cytoplasm. Orthologous to several human genes including N4BP2 (NEDD4 binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (172033..172755, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Yig1p Neighboring gene Csm4p Neighboring gene ribosomal 60S subunit protein L7B Neighboring gene ncRNA Neighboring gene Oxr1p

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. NONU-1 Encodes a Conserved Endonuclease Required for mRNA Translation Surveillance. Glover ML, et al. Cell Rep, 2020 Mar 31. PMID 32234470, Free PMC Article
  2. CSS-Palm 2.0: an updated software for palmitoylation sites prediction. Ren J, et al. Protein Eng Des Sel, 2008 Nov. PMID 18753194, Free PMC Article
  3. Protein Interactions of the Mechanosensory Proteins Wsc2 and Wsc3 for Stress Resistance in Saccharomyces cerevisiae. Vélez-Segarra V, et al. G3 (Bethesda), 2020 Sep 2. PMID 32641451, Free PMC Article
  4. Identification and Functional Testing of Novel Interacting Protein Partners for the Stress Sensors Wsc1p and Mid2p of Saccharomyces cerevisiae. Santiago-Cartagena E, et al. G3 (Bethesda), 2019 Apr 9. PMID 30733383, Free PMC Article
  5. α-Synuclein Decreases the Abundance of Proteasome Subunits and Alters Ubiquitin Conjugates in Yeast. Popova B, et al. Cells, 2021 Aug 28. PMID 34571878, Free PMC Article

See all (25) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in nuclear-transcribed mRNA catabolic process, non-stop decay IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
NP_015125.1
  • Protein involved in nonstop mRNA decay; predicted to be palmitoylated

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    172033..172755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184013.1 → NP_015125.1  TPA: uncharacterized protein YPL199C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015125.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W3H0, Q08954
    UniProtKB/TrEMBL
    A6ZW55, B3LKN0, B5VSY0, C7GN27, G2WNY5, N1NVN5
    Conserved Domains (2) summary
    smart00463
    Location:94 → 172
    SMR; Small MutS-related domain
    pfam08590
    Location:28 → 89
    DUF1771; Domain of unknown function (DUF1771)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q08954.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools