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SSU1 Ssu1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 856013, updated on 18-Sep-2024

Summary

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Official Symbol
SSU1
Official Full Name
Ssu1p
Primary source
SGD:S000006013
Locus tag
YPL092W
See related
AllianceGenome:SGD:S000006013; FungiDB:YPL092W; VEuPathDB:YPL092W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
LPG16
Summary
Enables sulfite transmembrane transporter activity. Involved in sulfite transport. Located in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See SSU1 in Genome Data Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (373793..375169)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Sec63 complex subunit SEC62 Neighboring gene putative GTPase NOG1 Neighboring gene glutathione-disulfide reductase GLR1 Neighboring gene ribosomal 40S subunit protein S6A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001148.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SSU1 Checkup, a Rapid Tool for Detecting Chromosomal Rearrangements Related to the SSU1 Promoter in Saccharomyces cerevisiae: An Ecological and Technological Study on Wine Yeast. Marullo P, et al. Front Microbiol, 2020. PMID 32695077, Free PMC Article
  2. The impact of CUP1 gene copy-number and XVI-VIII/XV-XVI translocations on copper and sulfite tolerance in vineyard Saccharomyces cerevisiae strain populations. Crosato G, et al. FEMS Yeast Res, 2020 Jun 1. PMID 32436567
  3. A new chromosomal rearrangement improves the adaptation of wine yeasts to sulfite. García-Ríos E, et al. Environ Microbiol, 2019 May. PMID 30859719
  4. Brettanomyces bruxellensis SSU1 Haplotypes Confer Different Levels of Sulfite Tolerance When Expressed in a Saccharomyces cerevisiae SSU1 Null Mutant. Varela C, et al. Appl Environ Microbiol, 2019 Feb 15. PMID 30552183, Free PMC Article
  5. Ecological interactions among Saccharomyces cerevisiae strains: insight into the dominance phenomenon. Pérez-Torrado R, et al. Sci Rep, 2017 Mar 7. PMID 28266552, Free PMC Article

See all (42) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Positive selection was detected in SSU1 gene at three sites.
    Title: [Molecular evolution of the sulphite efflux gene SSU1 in Saccharomyces cerevisiae].
  2. The study of SSU1 expression during fermentation and in different growth conditions showed that sulphite is the main regulator of SSU1 expression.
    Title: A sulphite-inducible form of the sulphite efflux gene SSU1 in a Saccharomyces cerevisiae wine yeast.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables sulfite transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables sulfite transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in sulfite transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in sulfite transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell periphery HDA PubMed 
located_in endoplasmic reticulum HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Ssu1p
NP_015233.1
  • Plasma membrane sulfite pump involved in sulfite metabolism; required for efficient sulfite efflux; major facilitator superfamily protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    373793..375169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183906.1 → NP_015233.1  TPA: Ssu1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_015233.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W3S5, P41930, P87026, Q02893, Q2VQ61, Q2VQ65, Q2VQ70, Q2VQ74, Q2VQ76, Q2VQ77, Q8J1R0, Q8J1R1
    UniProtKB/TrEMBL
    C7GJ46, G2WP89, N1NW35
    Conserved Domains (1) summary
    cd09318
    Location:9 → 405
    TDT_SSU1; Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes sulfite sensitivity protein (sulfite efflux pump; SSU1)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P41930.5

Gene LinkOut

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